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SCN18_14_9_16_R1_B_scaffold_1558

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1558_1
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

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3..317
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5L1_SORCE
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EYF02714.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1558_2
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

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317..1123
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XS96_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF05678.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1558_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1096..2256
DNA (1161bp) protein (387aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2I9_PHYPA
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1558_4
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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2253..3401
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6A3_MYXSD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
SCN18_14_9_16_R1_B_scaffold_1558_5
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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3398..4570
DNA (1173bp) protein (391aa)
Tax=RBG_13_Chloroflexi_60_13_curated
SCN18_14_9_16_R1_B_scaffold_1558_6
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4675..5943
DNA (1269bp) protein (423aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGQ1_9CHLR
chromosome condensation regulator RCC1
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:EFO79638.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
SCN18_14_9_16_R1_B_scaffold_1558_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5974..7773
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08151.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1558_8
unknown

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7987..9018
DNA (1032bp) protein (344aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1558_9
unknown

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9034..9279
DNA (246bp) protein (82aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1558_10
unknown

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9740..10078
DNA (339bp) protein (113aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1558_11
unknown

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comp(9970..10641)
DNA (672bp) protein (224aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1558_12
unknown

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comp(10699..10830)
DNA (132bp) protein (44aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1558_trna_1
unknown

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10876..10949
DNA (74bp)
transferRNA Arg
SCN18_14_9_16_R1_B_scaffold_1558_13
unknown

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11358..11555
DNA (198bp) protein (66aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1558_14
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11919..13007)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PDN8_9DELT
Histidine kinase {ECO:0000313|EMBL:AKF03944.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
multi-sensor signal transduction histidine kinase
SCN18_14_9_16_R1_B_scaffold_1558_15
unknown

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comp(13622..14038)
DNA (417bp) protein (139aa)

This feature has no annotations

Displaying 16 items

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