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SCN18_14_9_16_R1_B_scaffold_2048

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2048_1
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..1584)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNL6_SORCE
Adenylate cyclase {ECO:0000313|EMBL:EYF06513.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2048_2
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

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comp(1690..3042)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FC64_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91630.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_2048_3
unknown

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comp(3061..3843)
DNA (783bp) protein (261aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2048_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4139..5959
DNA (1821bp) protein (607aa)
Outer membrane porin n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GL52_SORC5
Outer membrane porin {ECO:0000313|EMBL:CAN90226.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2048_5
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5956..6888
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCN0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM76382.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
SCN18_14_9_16_R1_B_scaffold_2048_6
SCNpilot_BF_INOC_Bacteroidetes_39_46, SCNpilot_BF_INOC_Bacteroidetes_39_46, SCNpilot_BF_INOC_Bacteroidetes_39_46, BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

6899..7318
DNA (420bp) protein (140aa)
Large-conductance mechanosensitive channel n=1 Tax=Porphyromonas crevioricanis JCM 15906 RepID=T1CRE3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN90331.1}; TaxID=393921 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas crevioricanis.;"
large conductance mechanosensitive channel protein
SCN18_14_9_16_R1_B_scaffold_2048_7
unknown

Not on your lists

7402..7767
DNA (366bp) protein (122aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2048_8
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7748..9562)
DNA (1815bp) protein (605aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JA33_NITOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI19243.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
SCN18_14_9_16_R1_B_scaffold_2048_9
unknown

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comp(9984..10379)
DNA (396bp) protein (132aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2048_10
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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comp(10742..11266)
DNA (525bp) protein (175aa)
FHA domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEZ0_SORC5
hypothetical protein
FHA domain protein {ECO:0000313|EMBL:CAN93077.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_2048_11
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11256..12824)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV04_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF04635.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2048_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12914..13066)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XW94_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93076.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying 12 items

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