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SCN18_14_9_16_R1_B_scaffold_2236

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2236_1
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1071
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QZY4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX62213.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2236_2
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(1105..1530)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00036F1D30
hypothetical protein
Tax=RBG_16_Planctomycetes_43_13_curated
SCN18_14_9_16_R1_B_scaffold_2236_3
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1625..2485
DNA (861bp) protein (287aa)
SCN18_14_9_16_R1_B_scaffold_2236_4
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

comp(2560..3291)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003704E0A
Predicted protein {ECO:0000313|EMBL:EDR01468.1}; TaxID=486041 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Tricholomataceae; Laccaria.;" source="Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured; deceiver) (Laccaria laccata var. bicolor).;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2236_5
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3628..4275)
DNA (648bp) protein (216aa)
Transcriptional regulator, TetR family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P1T1_9DELT
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:KFE66221.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
TetR family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_2236_6
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

Not on your lists

4385..5263
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIT3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41446.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
fatty acid desaturase
SCN18_14_9_16_R1_B_scaffold_2236_7
unknown

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comp(5314..5562)
DNA (249bp) protein (83aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2236_8
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5784..8627)
DNA (2844bp) protein (948aa)
Putative low-complexity protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L3N9_9CYAN
pentapeptide repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EOD20800.1, ECO:0000313|EnsemblProtists:EOD20800}; Flags: Fragment;; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emiliania huxleyi CCMP1516.;"
SCN18_14_9_16_R1_B_scaffold_2236_9
unknown

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comp(8639..10651)
DNA (2013bp) protein (671aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2236_10
unknown

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comp(10593..11915)
DNA (1323bp) protein (441aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2236_11
unknown

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12254..12700
DNA (447bp) protein (149aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2236_12
unknown

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12697..13029
DNA (333bp) protein (111aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2236_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13182..13493)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XM04_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF03304.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2236_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13447..15096)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRC5_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF03304.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2236_15
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15093..16046)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP39_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF03306.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2236_16
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

comp(16060..18306)
DNA (2247bp) protein (749aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8P0_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08730.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2236_17
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

18568..19956
DNA (1389bp) protein (463aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FIF3_SORC5
sigma-54 dependent DNA-binding response regulator
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:CAN91849.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_2236_18
unknown

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comp(19990..20886)
DNA (897bp) protein (299aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2236_19
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

20920..22554
DNA (1635bp) protein (545aa)
Putative uncharacterized protein id=2107098 bin=GWA2_Elusimicrobia_69_24 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
PAS/PAC sensor hybrid histidine kinase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
SCN18_14_9_16_R1_B_scaffold_2236_20
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

22557..22757
DNA (201bp) protein (67aa)
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase id=4925249 bin=GWC2_Nitrospirae-rel_56_14 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
SCN18_14_9_16_R1_B_scaffold_2236_21
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22809..23732)
DNA (924bp) protein (308aa)
Alpha/beta fold family hydrolase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUW2_CORCM
ycdJ1; alpha/beta fold family hydrolase
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:AFE10779.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCN18_14_9_16_R1_B_scaffold_2236_22
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24033..24737)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5N2_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF08149.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
Displaying 22 items

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