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SCN18_14_9_16_R1_B_scaffold_2290

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2290_1
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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1..333
DNA (333bp) protein (111aa)
Luciferase family protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LHI6_FRASN
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABW15805.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCN18_14_9_16_R1_B_scaffold_2290_2
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(349..651)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4Q0R1_9CAUL
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_14_9_16_R1_B_scaffold_2290_3
unknown

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comp(694..1251)
DNA (558bp) protein (186aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2290_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1262..2704)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TKT1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF05118.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
signal peptide prediction
SCN18_14_9_16_R1_B_scaffold_2290_5
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2717..4441)
DNA (1725bp) protein (575aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EWH0_SORC5
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAN94319.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_2290_6
scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, scnpilot_dereplicated_Plasmid_Sphingomonas_1, Plasmid-like

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5005..6126
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037BC67F
transaldolase
Tax=RBG_16_Desulfobacca_60_12_curated
SCN18_14_9_16_R1_B_scaffold_2290_7
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

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comp(6167..7945)
DNA (1779bp) protein (593aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HED4_ANADF
Marine sediment metagenome DNA, contig: S03H2_L05169 {ECO:0000313|EMBL:GAH46058.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2290_8
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8171..8548)
DNA (378bp) protein (126aa)
DGPFAETKE family protein n=2 Tax=Sphingomonas wittichii RepID=A5V5B0_SPHWW
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AKF10365.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
DGPFAETKE family protein
SCN18_14_9_16_R1_B_scaffold_2290_9
Rhodanobacter denitrificans_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8627..9943)
DNA (1317bp) protein (439aa)
RNA polymerase subunit sigma-24 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHY5_SORCE
RNA polymerase subunit sigma-24
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AGP32752.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2290_10
unknown

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comp(10033..10314)
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying 10 items

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