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SCN18_14_9_16_R1_B_scaffold_2632

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2632_1
unknown

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comp(3..131)
DNA (129bp) protein (43aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2632_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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296..889
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSS3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34930.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2632_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1024..1899
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQZ8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34929.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2632_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1913..2455)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTU4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35791.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2632_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2470..3507)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FII9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91859.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_2632_6
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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3817..4362
DNA (546bp) protein (182aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNH8_SORCE
tRNA methyltransferase
SCN18_14_9_16_R1_B_scaffold_2632_7
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4487..5899
DNA (1413bp) protein (471aa)
Type 4 fimbriae expression regulatory protein PilR n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6V4D3_PSEA7
type 4 fimbriae expression regulatory protein PilR
Type 4 fimbriae expression regulatory protein PilR {ECO:0000313|EMBL:ABR84419.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain PA7).;"
SCN18_14_9_16_R1_B_scaffold_2632_8
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(5950..7107)
DNA (1158bp) protein (386aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XV44_9BACT
sensor protein
SCN18_14_9_16_R1_B_scaffold_2632_9
unknown

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comp(7175..7531)
DNA (357bp) protein (119aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2632_10
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7781..9049
DNA (1269bp) protein (423aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHC5_CHLTF
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain-containing protein
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain protein {ECO:0000313|EMBL:AEP12188.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
SCN18_14_9_16_R1_B_scaffold_2632_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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9179..9436
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW93472.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Displaying 11 items

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