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SCN18_14_9_16_R1_B_scaffold_2938

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2938_1
Chlamydia sp. 'Rubis'_SCNPILOT_EXPT_500_P_Chlamydiales_33_8, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(2..1189)
DNA (1188bp) protein (396aa)
Type III secretion protein LcrD/AscV n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CBT6_MYXFH
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:AKF07843.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
type III secretion protein LcrD/AscV
SCN18_14_9_16_R1_B_scaffold_2938_2
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1632..1991
DNA (360bp) protein (120aa)
pp2c13; phosphoprotein phosphatase (EC:3.1.3.16)
Phosphoprotein phosphatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GXN2_SORC5
Putative phosphatase {ECO:0000313|EMBL:EYF04246.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCN18_14_9_16_R1_B_scaffold_2938_3
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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1970..2374
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4G4_SORCE
Putative phosphatase {ECO:0000313|EMBL:EYF04246.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2938_4
Candidatus Caedibacter acanthamoebae_SCNPILOT_EXPT_500_P_Alphaproteobacteria_novel_39_47, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2763..3788
DNA (1026bp) protein (342aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ddlB; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJU9_SORCE
SCN18_14_9_16_R1_B_scaffold_2938_5
unknown

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comp(4196..4501)
DNA (306bp) protein (102aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2938_6
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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4503..6218
DNA (1716bp) protein (572aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] id=12557219 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
SCN18_14_9_16_R1_B_scaffold_2938_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6282..6914)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Pseudomonas veronii RepID=UPI00036A3420
Uncharacterized protein {ECO:0000313|EMBL:KEH32788.1, ECO:0000313|EnsemblPlants:KEH32788}; TaxID=3880 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago.;" source="Medicago truncatula (Barrel medic) (Medicago tribuloides).;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2938_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6986..8599
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4Q9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39205.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2938_9
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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8596..9678
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y326_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39204.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2938_10
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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9675..10586
DNA (912bp) protein (304aa)
Inner-membrane translocator n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LT64_HALO1
inner-membrane translocator
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 10 items

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