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SCN18_26_2_15_R5_F_scaffold_2594

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_F_scaffold_2594_1
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1216
DNA (1215bp) protein (405aa)
Putative Type IV secretory pathway, VirB4 component (CagE, TrbE, VirB ) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUJ5_THIA3
Conjugal transfer protein TrbE {ECO:0000313|EMBL:CDW96359.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Type IV secretory pathway, VirB4 component (CagE, TrbE, VirB )
SCN18_26_2_15_R5_F_scaffold_2594_2
SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, Plasmid-like

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1213..2715
DNA (1503bp) protein (501aa)
Cell wall surface anchor family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2J9_THIK1
Uncharacterized protein {ECO:0000313|EMBL:CDW96358.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
cell wall surface anchor family protein
SCN18_26_2_15_R5_F_scaffold_2594_3
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2727..3434
DNA (708bp) protein (236aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2J8_THIK1
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:CDW96357.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
P-type conjugative transfer protein TrbJ
SCN18_26_2_15_R5_F_scaffold_2594_4
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3444..5081
DNA (1638bp) protein (546aa)
P-type conjugative transfer protein TrbL n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2J7_THIK1
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:CDW96356.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
P-type conjugative transfer protein TrbL
SCN18_26_2_15_R5_F_scaffold_2594_5
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5083..5325
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2J6_THIK1
Uncharacterized protein {ECO:0000313|EMBL:CDW96355.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
SCN18_26_2_15_R5_F_scaffold_2594_6
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5374..5742)
DNA (369bp) protein (123aa)
Transcriptional regulator, XRE family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2J3_THIK1
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CDW96354.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
XRE family transcriptional regulator
SCN18_26_2_15_R5_F_scaffold_2594_7
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5739..5996)
DNA (258bp) protein (86aa)
Gp70 n=6 Tax=root RepID=C4I4Z7_BURPE
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:CDW96353.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
plasmid stabilization system family protein
SCN18_26_2_15_R5_F_scaffold_2594_8
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6183..6362
DNA (180bp) protein (60aa)
Conjugal transfer protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2J1_THIK1
Putative conjugal transfer protein {ECO:0000313|EMBL:CDW92523.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Conjugal transfer protein
SCN18_26_2_15_R5_F_scaffold_2594_9
Achromobacter denitrificans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6407..6502
DNA (96bp) protein (32aa)
Putative transposase n=1 Tax=Burkholderia cepacia RepID=P94291_BURCE
TnpA {ECO:0000313|EMBL:AAS49431.1}; TaxID=32002 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter denitrificans (Alcaligenes denitrificans).;"
ISXo7 transposase
Displaying 9 items

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