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SCN18_26_2_15_R5_F_scaffold_1101

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_F_scaffold_1101_1
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105..800
DNA (696bp) protein (232aa)
Putative AraD-like aldolase/epimerase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLP5_THIA3
putative AraD-like aldolase/epimerase
Putative AraD-like aldolase/epimerase {ECO:0000313|EMBL:CAZ89473.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_1101_2
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

834..2279
DNA (1446bp) protein (482aa)
Protein sufB n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLP4_THIA3
sufB; Protein sufB
Protein sufB {ECO:0000313|EMBL:CAZ89472.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_1101_3
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2301..3113
DNA (813bp) protein (271aa)
FeS assembly ATPase SufC n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5C2_THIK1
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:ADG31815.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_1101_4
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3116..4435
DNA (1320bp) protein (440aa)
FeS assembly protein SufD n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5C1_THIK1
FeS assembly protein SufD
FeS assembly protein SufD {ECO:0000313|EMBL:CDW94473.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
SCN18_26_2_15_R5_F_scaffold_1101_5
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4432..5682
DNA (1251bp) protein (417aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
sufS; Cysteine desulfurase (Selenocysteine lyase) (Selenocysteine reductase) (Selenocysteine beta-lyase) (SCL) (EC:4.4.1.16)
Cysteine desulfurase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLP1_THIA3
SCN18_26_2_15_R5_F_scaffold_1101_6
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5701..6198
DNA (498bp) protein (166aa)
Putative NIF system FeS cluster assembly, NifU n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLP0_THIA3
putative NIF system FeS cluster assembly, NifU
Putative NIF system FeS cluster assembly, NifU {ECO:0000313|EMBL:CAZ89468.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_1101_7
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6201..6761
DNA (561bp) protein (187aa)
Putative metal-sulfur cluster biosynthetic enzyme n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLN9_THIA3
putative metal-sulfur cluster biosynthetic enzyme
Putative metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:CAZ89467.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_1101_8
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6835..7128)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLN8_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ89466.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_1101_9
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7188..7889)
DNA (702bp) protein (234aa)
Iron-sulfur cluster repair di-iron protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5B6_THIK1
Iron-sulfur cluster repair protein YtfE {ECO:0000313|EMBL:CDW94480.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
iron-sulfur cluster repair di-iron protein
SCN18_26_2_15_R5_F_scaffold_1101_10
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7999..8439
DNA (441bp) protein (147aa)
Putative Transcriptional regulator n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLN6_THIA3
putative Transcriptional regulator
Putative Transcriptional regulator {ECO:0000313|EMBL:CAZ89464.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_1101_11
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8447..8851)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLN5_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW94482.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
SCN18_26_2_15_R5_F_scaffold_1101_12
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9012..9365)
DNA (354bp) protein (118aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Alkylhydroperoxidase like protein, AhpD family n=2 Tax=Thiomonas RepID=D5X5B3_THIK1
alkylhydroperoxidase
SCN18_26_2_15_R5_F_scaffold_1101_13
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9541..10080
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLN1_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW94484.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
conserved hypothetical protein Hemerythrin-like protein
SCN18_26_2_15_R5_F_scaffold_1101_14
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10112..11161)
DNA (1050bp) protein (350aa)
Transposase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2V3_THIK1
transposase
Transposase {ECO:0000313|EMBL:ADG29451.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_1101_15
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11391..12371)
DNA (981bp) protein (327aa)
Putative D-amino-acid dehydrogenase {ECO:0000313|EMBL:CDW94487.1}; EC=1.4.99.1 {ECO:0000313|EMBL:CDW94487.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative D-amino-acid dehydrogenase (EC:1.4.99.1)
Putative D-amino-acid dehydrogenase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLM9_THIA3
SCN18_26_2_15_R5_F_scaffold_1101_16
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12390..13355
DNA (966bp) protein (322aa)
Transposase IS4 family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1E2_THIK1
Putative transposase {ECO:0000313|EMBL:CDW94489.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
transposase IS4 family protein
SCN18_26_2_15_R5_F_scaffold_1101_trna_2
unknown

Not on your lists

comp(13570..13642)
DNA (73bp)
transferRNA Lys
SCN18_26_2_15_R5_F_scaffold_1101_trna_1
unknown

Not on your lists

comp(13682..13754)
DNA (73bp)
transferRNA Lys
SCN18_26_2_15_R5_F_scaffold_1101_17
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13775..14575)
DNA (801bp) protein (267aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5A9_THIK1
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ADG31802.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_1101_18
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14587..15702)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5A8_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31801.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_1101_19
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15873..16688)
DNA (816bp) protein (272aa)
Putative Tol-Pal system, YbgF protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLM4_THIA3
putative Tol-Pal system, YbgF protein
Putative Tol-Pal system, YbgF protein {ECO:0000313|EMBL:CAZ89452.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_26_2_15_R5_F_scaffold_1101_20
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16685..17227)
DNA (543bp) protein (181aa)
Peptidoglycan-associated lipoprotein (19 kDa surface antigen) (PPL) n=2 Tax=Thiomonas RepID=D6CLM3_THIA3
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:CDW93265.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
pal; Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL)
SCN18_26_2_15_R5_F_scaffold_1101_21
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17343..18659)
DNA (1317bp) protein (439aa)
Protein TolB n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLM2_THIA3
putative Protein tolB precursor
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCN18_26_2_15_R5_F_scaffold_1101_22
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18845..18973)
DNA (129bp) protein (43aa)
Putative glycosyltransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLM1_THIA3
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:CAZ89449.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Displaying 24 items

View Taxonomy