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SCN18_14_9_16_R4_B_scaffold_2028

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2028_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(83..847)
DNA (765bp) protein (255aa)
molybdopterin-binding protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AFF7E
Putative nuleotide-utilizing enzyme, moeA {ECO:0000313|EMBL:EJK86612.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
molybdopterin-binding protein
SCN18_14_9_16_R4_B_scaffold_2028_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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895..1722
DNA (828bp) protein (276aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
methionine aminopeptidase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003644BCF
methionine aminopeptidase
SCN18_14_9_16_R4_B_scaffold_2028_3
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1736..2494)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B70ECC
Uncharacterized protein {ECO:0000313|EMBL:EKS32678.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2028_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2647..4800
DNA (2154bp) protein (718aa)
adh; Alcohol dehydrogenase [cytochrome c] (EC:1.1.2.8)
Pyrrolo-quinoline quinone n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHV2_9SPHN
Putative quinohemoprotein alcohol dehydrogenase {ECO:0000313|EMBL:GAO40448.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SCN18_14_9_16_R4_B_scaffold_2028_5
Acinetobacter gerneri, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4969..5403)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Acinetobacter gerneri RepID=N8ZTS7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV34900.1}; TaxID=1120926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter gerneri DSM 14967 = CIP 107464.;"
SCN18_14_9_16_R4_B_scaffold_2028_6
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5419..5871)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQD4_SPHAL
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCN18_14_9_16_R4_B_scaffold_2028_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6121..6459
DNA (339bp) protein (113aa)
Nitrogen regulatory P-II family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZM9_9SPHN
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:AHE55290.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
nitrogen regulatory protein P-II
SCN18_14_9_16_R4_B_scaffold_2028_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6537..7949
DNA (1413bp) protein (471aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Sphingomonas sp. S17 RepID=F3WZN0_9SPHN
SCN18_14_9_16_R4_B_scaffold_2028_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8138..8560
DNA (423bp) protein (141aa)
50S ribosomal protein L17 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FED7EC
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
50S ribosomal protein L17
SCN18_14_9_16_R4_B_scaffold_2028_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8652..8957
DNA (306bp) protein (102aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Sphingomonas sp. S17 RepID=F3WXW1_9SPHN
Displaying 10 items

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