ggKbase home page

SCN18_14_9_16_R4_B_scaffold_2100

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2100_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78..374
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VU60_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU14185.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2100_2
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(424..1425)
DNA (1002bp) protein (334aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0J8_9GAMM
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL92989.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_2100_3
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1482..2504)
DNA (1023bp) protein (341aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T5K6_CAUSK
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABZ69564.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCN18_14_9_16_R4_B_scaffold_2100_4
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2501..3652)
DNA (1152bp) protein (384aa)
Oxidoreductase domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T5K5_CAUSK
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABZ69563.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCN18_14_9_16_R4_B_scaffold_2100_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4074..6416
DNA (2343bp) protein (781aa)
Putative TonB dependent receptor protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FKT0_STRMK
TonB dependent receptor protein
Putative TonB dependent receptor protein {ECO:0000313|EMBL:CAQ47763.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCN18_14_9_16_R4_B_scaffold_2100_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6437..6634
DNA (198bp) protein (66aa)
SCN18_14_9_16_R4_B_scaffold_2100_7
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6638..6940)
DNA (303bp) protein (101aa)
Plasmid maintenance system antidote protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SFW8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA10870.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
SCN18_14_9_16_R4_B_scaffold_2100_8
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6930..7220)
DNA (291bp) protein (97aa)
plasmid maintenance system killer protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI00030F0F41
plasmid maintenance system killer
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
SCN18_14_9_16_R4_B_scaffold_2100_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7298..7912)
DNA (615bp) protein (205aa)
PREDICTED: probable transcriptional regulator ycf29-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16603
Chemotaxis protein CheY {ECO:0000313|EMBL:EQM86956.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
nitrogen regulation protein NR(I)
SCN18_14_9_16_R4_B_scaffold_2100_10
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7909..8652)
DNA (744bp) protein (248aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Sensor histidine kinase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YIQ3_PARAH
sensor histidine kinase
Displaying 10 items

View Taxonomy