ggKbase home page

SCN18_14_9_16_R4_B_scaffold_2134

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2134_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..439
DNA (438bp) protein (146aa)
Crp family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJD2_9SPHN
Crp family transcriptional regulator
Crp family transcriptional regulator {ECO:0000313|EMBL:BAK64802.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_14_9_16_R4_B_scaffold_2134_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

491..2245
DNA (1755bp) protein (585aa)
peptidase S41 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036F2C99
Cytochrome Cbb3 oxidase subunit I {ECO:0000313|EMBL:AHL30239.1}; Flags: Fragment;; TaxID=863935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NX-3.;"
ccoN; cytochrome c oxidase cbb3-type subunit I
SCN18_14_9_16_R4_B_scaffold_2134_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2260..2994
DNA (735bp) protein (245aa)
peptidase S41 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB65
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:AJP71807.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_14_9_16_R4_B_scaffold_2134_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2991..3149
DNA (159bp) protein (53aa)
Cbb3-type cytochrome oxidase subunit 3 n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0IGQ4_9SPHN
Cbb3-type cytochrome oxidase subunit 3 {ECO:0000313|EMBL:EXS68446.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
Cbb3-type cytochrome oxidase subunit 3
SCN18_14_9_16_R4_B_scaffold_2134_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3142..4074
DNA (933bp) protein (311aa)
cytochrome CBB3 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB63
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ccoP; cytochrome c oxidase cbb3-type subunit III
SCN18_14_9_16_R4_B_scaffold_2134_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4061..5557
DNA (1497bp) protein (499aa)
nitrogen fixation protein fixG n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB62
Uncharacterized protein {ECO:0000313|EMBL:EQB12994.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
nitrogen fixation protein FixG
SCN18_14_9_16_R4_B_scaffold_2134_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5554..6012
DNA (459bp) protein (153aa)
integral membrane protein linked to a cation pump n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E3A5BA
FixH {ECO:0000313|EMBL:AKH43783.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
fixH; nitrogen fixation protein FixH
SCN18_14_9_16_R4_B_scaffold_2134_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6009..8135
DNA (2127bp) protein (709aa)
ATPase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB60
Uncharacterized protein {ECO:0000313|EMBL:EQB12992.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
nitrogen fixation protein FixI
SCN18_14_9_16_R4_B_scaffold_2134_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8132..8323
DNA (192bp) protein (64aa)
cytochrome oxidase maturation protein Cbb3 n=1 Tax=Sphingomonas elodea RepID=UPI0002631017
fixS; nitrogen fixation protein FixS
Nitrogen fixation protein FixS, putative {ECO:0000313|EMBL:ACI98680.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Displaying 9 items

View Taxonomy