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SCN18_14_9_16_R4_B_scaffold_2268

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2268_1
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..930
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B46518
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46571.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCN18_14_9_16_R4_B_scaffold_2268_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1006..3030)
DNA (2025bp) protein (675aa)
RNA polymerase sigma factor RpoD n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3A55C
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
RNA polymerase sigma factor RpoD
SCN18_14_9_16_R4_B_scaffold_2268_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3030..4907)
DNA (1878bp) protein (626aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003725697
DNA primase
SCN18_14_9_16_R4_B_scaffold_2268_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5087..5539)
DNA (453bp) protein (151aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6A1AF
Sphingomonas taxi strain 30a NODE_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28758.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
aspartyl-tRNA amidotransferase
SCN18_14_9_16_R4_B_scaffold_2268_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5645..6817
DNA (1173bp) protein (391aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Sphingomonas sp. S17 RepID=F3WUZ2_9SPHN
carbamoyl-phosphate synthase
SCN18_14_9_16_R4_B_scaffold_2268_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6881..8020
DNA (1140bp) protein (380aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
carbamoyl phosphate synthase large subunit n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B31822
carbamoyl phosphate synthase large subunit
Displaying 6 items

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