ggKbase home page

SCN18_14_9_16_R4_B_scaffold_2896

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2896_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..200
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003701817
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT06652.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_2896_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

397..1128
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003729697
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
DNA recombination protein RecO
SCN18_14_9_16_R4_B_scaffold_2896_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1175..2218
DNA (1044bp) protein (348aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
3-isopropylmalate dehydrogenase n=1 Tax=Sphingomonas melonis RepID=UPI00036DE76C
3-isopropylmalate dehydrogenase
SCN18_14_9_16_R4_B_scaffold_2896_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2279..3544)
DNA (1266bp) protein (422aa)
dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B63366
dolichyl-phosphate-mannose-protein mannosyltransferase
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:AIT06648.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_2896_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3722..5008
DNA (1287bp) protein (429aa)
O-succinylhomoserine sulfhydrylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8D7
Cystathionine gamma-synthase {ECO:0000313|EMBL:GAM00092.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
O-succinylhomoserine sulfhydrylase
SCN18_14_9_16_R4_B_scaffold_2896_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5005..5403
DNA (399bp) protein (133aa)
magnesium transporter ApaG n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA66C
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
apaG; ApaG protein
SCN18_14_9_16_R4_B_scaffold_2896_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5400..6191
DNA (792bp) protein (264aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas RepID=UPI0002881F4E
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AJP71019.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying 7 items

View Taxonomy