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SCN18_14_9_16_R4_B_scaffold_3190

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_3190_1
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..189
DNA (189bp) protein (63aa)
patatin n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288BF54
patatin
Patatin {ECO:0000313|EMBL:AIT05638.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_3190_2
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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243..551
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037737FB
Uncharacterized protein {ECO:0000313|EMBL:KHA64722.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_3190_3
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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548..1222
DNA (675bp) protein (225aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
orotidine 5''''-phosphate decarboxylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD58E
orotidine 5'-phosphate decarboxylase
SCN18_14_9_16_R4_B_scaffold_3190_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1386..2021
DNA (636bp) protein (212aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
N-(5''''-phosphoribosyl)anthranilate isomerase n=1 Tax=Sphingomonas melonis RepID=UPI00035C707D
N-(5'-phosphoribosyl)anthranilate isomerase
SCN18_14_9_16_R4_B_scaffold_3190_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2018..3229
DNA (1212bp) protein (404aa)
Tryptophan synthase beta chain {ECO:0000313|EMBL:AKH41255.1}; EC=4.2.1.20 {ECO:0000313|EMBL:AKH41255.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z856_9SPHN
SCN18_14_9_16_R4_B_scaffold_3190_6
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3226..4026
DNA (801bp) protein (267aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
tryptophan synthase subunit alpha n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD589
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCN18_14_9_16_R4_B_scaffold_3190_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4023..4877
DNA (855bp) protein (285aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
acetyl-CoA carboxylase subunit beta n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000363A915
acetyl-CoA carboxyl transferase
SCN18_14_9_16_R4_B_scaffold_3190_8
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4887..5690
DNA (804bp) protein (268aa)
FolC bifunctional protein {ECO:0000313|EMBL:ABF52778.1}; EC=6.3.2.17 {ECO:0000313|EMBL:ABF52778.1};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
FolC bifunctional protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GU94_SPHAL
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
Displaying 8 items

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