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SCN18_14_9_16_R4_B_scaffold_3190_6

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 3226..4026

Top 3 Functional Annotations

Value Algorithm Source
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 262.0
  • Bit_score: 399
  • Evalue 7.10e-109
tryptophan synthase subunit alpha n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD589 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 264.0
  • Bit_score: 415
  • Evalue 3.40e-113
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 261.0
  • Bit_score: 415
  • Evalue 4.70e-113

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Taxonomy

CN-SCN_Sphingomonas_18x → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGAGCCGCCTTTCCAACGCCTTCCCGAAGGATCGCGCGGCTTTGGTGTGCTTCATCACCGCGGGCGACCCGACGCCTGCGGCCACCCCGGCGATCCTCGACGCGCTGGTTGCCGGCGGCGCCGATGTGATCGAACTGGGCATGCCGTTCACCGATCCGATGGCCGACGGCCCGGCGATCCAGGCTGCCAATCTGCGCAGCCTCGGCGCCGGCACGACCACCGCCGATATCCTGACGATCGCACGCGATTTCCGCGCGCGTCACCCGCATGTGCCGTTGGTGCTGATGGGCTATGCCAATCCGATGCTGCGGCGCGGGGCGGAGTGGTTCGCCGGTGCGGCGCGCGATGCCGGGGTCGACGGGGTGATCTGCGTCGACACGCCGCCCGAGGAGGATGCCGCGCTCGGCCCGGCGTTGCGCGCGGCCGGCGTCCATTTGATCCGCCTCGCCACCCCGACCACCGACAGCGCGCGGCTCCCGACCGTCCTCACCGGGGCGAGCGGGTTCCTTTATTATGTCTCGGTCGCCGGGATCACCGGGCTGCAACAGGCCGCGCAAACCTCGATCGAGCAGGCCGTCGGGCGGCTCAAGGCCGCGACCGATTTGCCCGTCGCGGTCGGCTTCGGCGTCCGCACCCCGGAACAGGCCGAGGCGATCGCGCGTGTCGCCGATGGCGTGGTGGTCGGCTCGGCGATCGTCGACCTGATCGGCAAGCACGGCGCCGATGCGCCGGGCGCGATTACCCCTTATATCCAATCGCTGAGCGCTGCGATCCGCGGCGCGCGCAAGGAATCGAAATGA
PROTEIN sequence
Length: 267
MSRLSNAFPKDRAALVCFITAGDPTPAATPAILDALVAGGADVIELGMPFTDPMADGPAIQAANLRSLGAGTTTADILTIARDFRARHPHVPLVLMGYANPMLRRGAEWFAGAARDAGVDGVICVDTPPEEDAALGPALRAAGVHLIRLATPTTDSARLPTVLTGASGFLYYVSVAGITGLQQAAQTSIEQAVGRLKAATDLPVAVGFGVRTPEQAEAIARVADGVVVGSAIVDLIGKHGADAPGAITPYIQSLSAAIRGARKESK*