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SCN18_14_9_16_R4_B_scaffold_3413

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_3413_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..816)
DNA (816bp) protein (272aa)
magnesium and cobalt transporter n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037081B7
Sphingomonas taxi strain 30a NODE_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29986.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
cobalt transporter
SCN18_14_9_16_R4_B_scaffold_3413_2
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(818..1327)
DNA (510bp) protein (170aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
rRNA maturation factor n=1 Tax=Sphingomonas melonis RepID=UPI00036C03D0
rRNA maturation factor
SCN18_14_9_16_R4_B_scaffold_3413_3
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1324..1722)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FE963E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74108.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_14_9_16_R4_B_scaffold_3413_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1719..1958)
DNA (240bp) protein (80aa)
transcription factor n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B707B4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74109.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_14_9_16_R4_B_scaffold_3413_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2004..3002)
DNA (999bp) protein (333aa)
phosphate starvation-inducible phoH n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5B80D
DNA, contig: SP658 {ECO:0000313|EMBL:GAN15477.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
PhoH
SCN18_14_9_16_R4_B_scaffold_3413_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3108..4436)
DNA (1329bp) protein (443aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000364EAE2
(dimethylallyl)adenosine tRNA methylthiotransferase
SCN18_14_9_16_R4_B_scaffold_3413_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4445..5188)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000366FB68
Sphingomonas taxi strain 30a NODE_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29991.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
acyl-phosphate glycerol 3-phosphate acyltransferase
Displaying 7 items

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