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SCN18_14_9_16_R4_B_scaffold_1326

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1326_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..909)
DNA (909bp) protein (303aa)
Glycosyl transferase, group 1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAD1_NOVAD
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABD25192.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCN18_14_9_16_R4_B_scaffold_1326_2
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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comp(1201..2322)
DNA (1122bp) protein (374aa)
Glycosyl transferase, group 1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAD2_NOVAD
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABD25191.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCN18_14_9_16_R4_B_scaffold_1326_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2551..2802)
DNA (252bp) protein (84aa)
AtpC protein {ECO:0000313|EMBL:KIU27354.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KIU27354.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
F0F1 ATP synthase subunit epsilon n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B2F2E5
SCN18_14_9_16_R4_B_scaffold_1326_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2847..4316)
DNA (1470bp) protein (490aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
F0F1 ATP synthase subunit beta n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000364A085
ATP synthase F0F1 subunit beta
SCN18_14_9_16_R4_B_scaffold_1326_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4341..5219)
DNA (879bp) protein (293aa)
F0F1 ATP synthase subunit gamma n=1 Tax=Sphingomonas echinoides RepID=UPI00026C934E
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
ATP synthase F0F1 subunit gamma
SCN18_14_9_16_R4_B_scaffold_1326_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5288..6817)
DNA (1530bp) protein (510aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Sphingomonas sp. S17 RepID=F3X2U1_9SPHN
SCN18_14_9_16_R4_B_scaffold_1326_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6823..7392)
DNA (570bp) protein (190aa)
ATP synthase subunit delta n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3AC84
ATP synthase subunit delta
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1326_8
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7537..8247)
DNA (711bp) protein (237aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAO56285.1}; EC=4.2.1.17 {ECO:0000313|EMBL:GAO56285.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
enoyl-CoA hydratase (EC:4.2.1.17)
PREDICTED: probable enoyl-CoA hydratase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17755
SCN18_14_9_16_R4_B_scaffold_1326_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8315..9427
DNA (1113bp) protein (371aa)
AraC family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002884AD2
6-O-methylguanine DNA methyltransferase
6-O-methylguanine DNA methyltransferase {ECO:0000313|EMBL:AIT06696.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1326_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9541..11055
DNA (1515bp) protein (505aa)
CpaF protein secretory protein kinase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F7E53
Type II/IV secretion system family protein {ECO:0000313|EMBL:EZP55378.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
flagellar protein FlaI
SCN18_14_9_16_R4_B_scaffold_1326_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11228..12421
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000376E8B6
Uncharacterized protein {ECO:0000313|EMBL:GAM00830.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1326_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12461..13000)
DNA (540bp) protein (180aa)
poly (3-hydroxybutyrate) depolymerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B55ACF
Sphingomonas taxi strain 30a NODE_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27366.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
polyhydroxyalkanoate synthesis repressor PhaR
Displaying 12 items

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