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SCN18_14_9_16_R4_B_scaffold_1413

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1413_1
unknown

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3..92
DNA (90bp) protein (30aa)

This feature has no annotations

SCN18_14_9_16_R4_B_scaffold_1413_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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116..385
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5361A
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
30S ribosomal protein S15
SCN18_14_9_16_R4_B_scaffold_1413_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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538..2868
DNA (2331bp) protein (777aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Sphingomonas sp. S17 RepID=F3X0W1_9SPHN
polynucleotide phosphorylase/polyadenylase
SCN18_14_9_16_R4_B_scaffold_1413_4
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3210..4271
DNA (1062bp) protein (354aa)
SAM-dependent methyltransferase PhcB n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B62226
Methyltransferase type 12 {ECO:0000313|EMBL:KFG90252.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
type 12 methyltransferase
SCN18_14_9_16_R4_B_scaffold_1413_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4372..5145)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B1C90
Class II aldolase/adducin family protein {ECO:0000313|EMBL:EZP55505.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
class II aldolase/adducin domain-containing protein
SCN18_14_9_16_R4_B_scaffold_1413_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5431..8010
DNA (2580bp) protein (860aa)
ATPase AAA n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003812110
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ATPase AAA
SCN18_14_9_16_R4_B_scaffold_1413_7
SCNPILOT_CONT_750_P_Aeromonadales_61_5_9, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8048..9523
DNA (1476bp) protein (492aa)
sulfotransferase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288FAEE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT08017.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1413_8
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9551..10828)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289BD68
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:KEZ19300.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
TPR repeat protein
SCN18_14_9_16_R4_B_scaffold_1413_9
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10981..11931
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002888070
Uncharacterized protein {ECO:0000313|EMBL:AGU11557.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1413_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12116..12376)
DNA (261bp) protein (87aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas RepID=UPI0002882967
TonB-dependent receptor {ECO:0000313|EMBL:ESZ88052.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
TonB-dependent receptor-like protein
Displaying 10 items

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