ggKbase home page

SCN18_14_9_16_R4_B_scaffold_1428

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1428_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..556
DNA (555bp) protein (185aa)
decarboxylase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036919DF
Decarboxylase {ECO:0000313|EMBL:KHA63555.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
decarboxylase
SCN18_14_9_16_R4_B_scaffold_1428_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

677..1756
DNA (1080bp) protein (360aa)
Deoxyhypusine synthase-like protein {ECO:0000256|HAMAP-Rule:MF_00640}; EC=2.5.-.- {ECO:0000256|HAMAP-Rule:MF_00640};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
deoxyhypusine synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E25675
deoxyhypusine synthase
SCN18_14_9_16_R4_B_scaffold_1428_3
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1896..2561
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YD18_NITMU
Putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AJA09200.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
SCN18_14_9_16_R4_B_scaffold_1428_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2618..4510)
DNA (1893bp) protein (631aa)
asparagine synthase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CBCB2
Sphingomonas taxi strain 30a NODE_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28684.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
asparagine synthase
SCN18_14_9_16_R4_B_scaffold_1428_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4510..6027)
DNA (1518bp) protein (506aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035CE7D5
transmembrane protein EpsH
Transmembrane protein EpsH {ECO:0000313|EMBL:AIT05665.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1428_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6024..7166)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000361C51B
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EZP49050.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
group 1 glycosyl transferase
SCN18_14_9_16_R4_B_scaffold_1428_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7163..8164)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036A70AD
Uncharacterized protein {ECO:0000313|EMBL:EZP49049.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
FemAB
SCN18_14_9_16_R4_B_scaffold_1428_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8161..9000)
DNA (840bp) protein (280aa)
polysaccharide deacetylase n=1 Tax=Sphingomonas melonis RepID=UPI000372AE38
Polysaccharide deactylase, PEP-CTERM locus subfamily protein {ECO:0000313|EMBL:EZP49048.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
polysaccharide deacetylase
SCN18_14_9_16_R4_B_scaffold_1428_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9004..10020)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037A8F05
Uncharacterized protein {ECO:0000313|EMBL:EZP49047.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1428_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10057..11649)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003696D51
DNA, contig: SP611 {ECO:0000313|EMBL:GAN12513.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1428_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11646..12302)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003640484
Sphingomonas taxi strain 30a NODE_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28768.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
chromosome partitioning protein
Displaying 11 items

View Taxonomy