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SCN18_14_9_16_R4_B_scaffold_1524

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1524_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..719
DNA (717bp) protein (239aa)
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287B01D
SCN18_14_9_16_R4_B_scaffold_1524_2
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(836..1795)
DNA (960bp) protein (320aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9R3_STAND
pyridoxal-5'-phosphate-dependent protein subunit beta
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ADH88839.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCN18_14_9_16_R4_B_scaffold_1524_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1820..2758)
DNA (939bp) protein (313aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:BAK65068.1}; EC=4.3.1.12 {ECO:0000313|EMBL:BAK65068.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036C7048
ocd; ornithine cyclodeaminase
SCN18_14_9_16_R4_B_scaffold_1524_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2763..3902)
DNA (1140bp) protein (380aa)
peptidase M19 n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000375E779
peptidase M19, renal dipeptidase
Peptidase M19, renal dipeptidase {ECO:0000313|EMBL:ABQ69234.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_14_9_16_R4_B_scaffold_1524_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3892..5307)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003655565
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ABQ69233.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_14_9_16_R4_B_scaffold_1524_6
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5421..6263
DNA (843bp) protein (281aa)
Phenazine biosynthesis PhzF family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVG9_9SPHN
phenazine biosynthesis protein PhzF
Phenazine biosynthesis protein PhzF {ECO:0000313|EMBL:AIT05232.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1524_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6270..6716)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NAU1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAL99547.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1524_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6784..7653)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC124
RDD domain-containing protein {ECO:0000313|EMBL:EZP50051.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
RDD domain-containing protein
SCN18_14_9_16_R4_B_scaffold_1524_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7631..8653)
DNA (1023bp) protein (341aa)
membrane protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCB33
Uncharacterized protein {ECO:0000313|EMBL:EZP50052.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1524_10
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8650..9960)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC122
Uncharacterized protein {ECO:0000313|EMBL:EZP50053.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1524_11
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9957..10913)
DNA (957bp) protein (319aa)
UPI0003D5CD3E related cluster n=1 Tax=unknown RepID=UPI0003D5CD3E
Magnesium chelatase {ECO:0000313|EMBL:ETI60226.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
ATPase
SCN18_14_9_16_R4_B_scaffold_1524_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10910..11521)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002899A35
Uncharacterized protein {ECO:0000313|EMBL:EZP50055.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
Displaying 12 items

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