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SCN18_14_9_16_R4_B_scaffold_1597

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1597_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(107..628)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002883BDB
Uncharacterized protein {ECO:0000313|EMBL:KHA62900.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1597_2
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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713..1837
DNA (1125bp) protein (375aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184190}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DBCC9A
SCN18_14_9_16_R4_B_scaffold_1597_3
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1909..2391
DNA (483bp) protein (161aa)
aspartyl protease n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024893D5
aspartyl protease
Aspartyl protease {ECO:0000313|EMBL:AGH50235.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCN18_14_9_16_R4_B_scaffold_1597_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2424..3353
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037F200A
Permease {ECO:0000313|EMBL:KIY13919.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1597_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3364..3846
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037DB6A1
DNA, contig: SP657 {ECO:0000313|EMBL:GAN15434.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
GNAT family acetyltransferase
SCN18_14_9_16_R4_B_scaffold_1597_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3846..4160
DNA (315bp) protein (105aa)
cation transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489374
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:ABQ68481.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_14_9_16_R4_B_scaffold_1597_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4157..4507
DNA (351bp) protein (117aa)
competence protein TfoX n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B692AC
Uncharacterized protein {ECO:0000313|EMBL:AHE57379.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
tfoX; DNA transformation protein
SCN18_14_9_16_R4_B_scaffold_1597_8
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4520..5059)
DNA (540bp) protein (180aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
Inorganic pyrophosphatase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJR0_9SPHN
inorganic pyrophosphatase
SCN18_14_9_16_R4_B_scaffold_1597_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5142..7067)
DNA (1926bp) protein (642aa)
peptidase M61 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5C5A5
Sphingomonas taxi strain 30a NODE_36, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26286.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
peptidase M61
SCN18_14_9_16_R4_B_scaffold_1597_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7120..7776)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000379F4D2
Uncharacterized protein {ECO:0000313|EMBL:GAM00872.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
membrane protein
SCN18_14_9_16_R4_B_scaffold_1597_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8000..9262
DNA (1263bp) protein (421aa)
Histidyl-tRNA synthetase n=1 Tax=uncultured organism RepID=T1W798_9ZZZZ
Histidyl-tRNA synthetase {ECO:0000313|EMBL:AGU10404.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
histidyl-tRNA synthase
SCN18_14_9_16_R4_B_scaffold_1597_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9259..10335
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4EFE7
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
peptide chain release factor 1
SCN18_14_9_16_R4_B_scaffold_1597_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10442..11050
DNA (609bp) protein (203aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000369E5F3
HemK family modification methylase
Displaying 13 items

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