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SCN18_14_9_16_R4_B_scaffold_1603

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1603_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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153..1814
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F8D90
Peptidase M28 family protein {ECO:0000313|EMBL:GAM02459.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
peptidase M28
SCN18_14_9_16_R4_B_scaffold_1603_2
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1811..2776
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B30B95
agmatine deiminase
Agmatine deiminase {ECO:0000313|EMBL:AIT07099.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1603_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2865..3713
DNA (849bp) protein (283aa)
N-carbamoylputrescine amidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031B440A
N-carbamoylputrescine amidase {ECO:0000313|EMBL:GAM02455.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
N-carbamoylputrescine amidase
SCN18_14_9_16_R4_B_scaffold_1603_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3953..4648
DNA (696bp) protein (232aa)
chemotaxis protein CheY n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B59E2C
Sphingomonas taxi strain 30a NODE_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27154.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
chemotaxis protein CheY
SCN18_14_9_16_R4_B_scaffold_1603_5
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4773..5789
DNA (1017bp) protein (339aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhizobium sp. CF122 RepID=J2J9D1_9RHIZ
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EJL57653.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
reductase
SCN18_14_9_16_R4_B_scaffold_1603_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5793..7463)
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C79FB
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:AIT08184.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1603_7
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7460..8299)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F5209
Oxidoreductase {ECO:0000313|EMBL:KHA64168.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
6-phosphogluconate dehydrogenase
SCN18_14_9_16_R4_B_scaffold_1603_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8391..9635
DNA (1245bp) protein (415aa)
threonine dehydratase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003700E2F
DNA, contig: SP610 {ECO:0000313|EMBL:GAN12433.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
threonine dehydratase
SCN18_14_9_16_R4_B_scaffold_1603_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9987..10679
DNA (693bp) protein (231aa)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
arginyl-tRNA-protein transferase (EC:2.3.2.8)
arginyl-tRNA-protein transferase n=1 Tax=Sphingomonas RepID=UPI00028A237B
SCN18_14_9_16_R4_B_scaffold_1603_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10666..11004)
DNA (339bp) protein (113aa)
thiol:disulfide interchange protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B46684
thiol:disulfide interchange protein
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AJP72891.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying 10 items

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