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SCN18_14_9_16_R4_B_scaffold_1646

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1646_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(166..783)
DNA (618bp) protein (206aa)
glutathione S-transferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9BCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP72970.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_14_9_16_R4_B_scaffold_1646_2
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(851..1855)
DNA (1005bp) protein (335aa)
NAD(P)H quinone oxidoreductase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C032D
NAD(P)H-quinone oxidoreductase
NAD(P)H-quinone oxidoreductase {ECO:0000313|EMBL:AIT08314.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1646_3
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2246..4561
DNA (2316bp) protein (772aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003705DA4
ClpA protein {ECO:0000313|EMBL:GAN12070.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
clpA; Clp protease ClpX
SCN18_14_9_16_R4_B_scaffold_1646_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4876..6552
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003778ED3
signal peptide protein
Signal peptide protein {ECO:0000313|EMBL:AJP74571.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_14_9_16_R4_B_scaffold_1646_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6591..6785
DNA (195bp) protein (65aa)
SCN18_14_9_16_R4_B_scaffold_1646_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6833..7084
DNA (252bp) protein (84aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
exodeoxyribonuclease VII small subunit n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B37E84
exodeoxyribonuclease VII small subunit
SCN18_14_9_16_R4_B_scaffold_1646_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7081..7977
DNA (897bp) protein (299aa)
farnesyl-diphosphate synthase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9BC3
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:KHA64213.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
farnesyl-diphosphate synthase
SCN18_14_9_16_R4_B_scaffold_1646_8
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7983..8495
DNA (513bp) protein (171aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
phosphopantetheine adenylyltransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003807AA7
phosphopantetheine adenylyltransferase
SCN18_14_9_16_R4_B_scaffold_1646_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8550..10130
DNA (1581bp) protein (527aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Sphingomonas melonis RepID=UPI000362F1E6
S-adenosylmethionine tRNA ribosyltransferase
SCN18_14_9_16_R4_B_scaffold_1646_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10228..10440
DNA (213bp) protein (71aa)
membrane protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA125
membrane protein
Membrane protein {ECO:0000313|EMBL:AIT05439.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1646_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10514..10822
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036AF70A
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AIT05716.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1646_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10816..12630
DNA (1815bp) protein (605aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036AF70A
TonB-dependent receptor {ECO:0000313|EMBL:KHA63905.1}; Flags: Fragment;; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
TonB-dependent receptor
SCN18_14_9_16_R4_B_scaffold_1646_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12677..13390)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003683298
Sphingomonas taxi strain 30a NODE_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27282.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ribonuclease T
SCN18_14_9_16_R4_B_scaffold_1646_14
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13387..13818)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000363920D
Uncharacterized protein {ECO:0000313|EMBL:EZP52650.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
SCN18_14_9_16_R4_B_scaffold_1646_15
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14062..14907)
DNA (846bp) protein (282aa)
nicotinate-nucleotide pyrophosphorylase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036A432A
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:GAO38057.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
nicotinate-nucleotide pyrophosphorylase
SCN18_14_9_16_R4_B_scaffold_1646_16
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14904..15392)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000367532B
Bacterial SH3 domain protein {ECO:0000313|EMBL:EZP55322.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1646_17
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15478..15987
DNA (510bp) protein (170aa)
2-hydroxyacid dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B940F
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KHA65496.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
2-hydroxyacid dehydrogenase
Displaying 17 items

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