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SCN18_14_9_16_R4_B_scaffold_1902

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1902_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..283)
DNA (282bp) protein (94aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00038285C7
phosphoribosyl-ATP pyrophosphatase
SCN18_14_9_16_R4_B_scaffold_1902_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(316..498)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C3C01
Sphingomonas taxi strain 30a NODE_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28599.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1902_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(583..975)
DNA (393bp) protein (131aa)
ArsR family transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6473C
Sphingomonas taxi strain 30a NODE_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29580.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Lrp/AsnC-family transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_1902_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1040..4735
DNA (3696bp) protein (1232aa)
PutA protein {ECO:0000313|EMBL:KIU29581.1}; EC=1.2.1.88 {ECO:0000313|EMBL:KIU29581.1};; EC=1.5.5.2 {ECO:0000313|EMBL:KIU29581.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
putA1; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (EC:1.5.99.8)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037C7D91
SCN18_14_9_16_R4_B_scaffold_1902_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4988..5764
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7185C
Peptidase M23 {ECO:0000313|EMBL:KHA65161.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
peptidase M23
SCN18_14_9_16_R4_B_scaffold_1902_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5985..7319)
DNA (1335bp) protein (445aa)
Major facilitator superfamily MFS_1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8T1_NOVAD
Major facilitator transporter {ECO:0000313|EMBL:KHS46599.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
major facilitator transporter
SCN18_14_9_16_R4_B_scaffold_1902_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7363..8502
DNA (1140bp) protein (380aa)
ferredoxin n=1 Tax=Sphingomonas elodea RepID=UPI00026308A2
Uncharacterized protein {ECO:0000313|EMBL:GAO38491.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
dioxygenase
SCN18_14_9_16_R4_B_scaffold_1902_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8499..9347
DNA (849bp) protein (283aa)
citryl-CoA lyase (EC:4.1.3.34)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037087C5
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCN18_14_9_16_R4_B_scaffold_1902_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9411..10466)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037EF9B0
Amidohydrolase {ECO:0000313|EMBL:KHA63802.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
amidohydrolase
Displaying 9 items

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