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SCN18_14_9_16_R4_B_scaffold_1908

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1908_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1044
DNA (1044bp) protein (348aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:AIT06342.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AIT06342.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
aspartate aminotransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B512A4
SCN18_14_9_16_R4_B_scaffold_1908_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1235..1375
DNA (141bp) protein (47aa)
SCN18_14_9_16_R4_B_scaffold_1908_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1412..2068
DNA (657bp) protein (219aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Sphingomonas sp. S17 RepID=F3WYD4_9SPHN
methionine sulfoxide reductase A
SCN18_14_9_16_R4_B_scaffold_1908_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2086..2262)
DNA (177bp) protein (59aa)
UPF0434 protein SUS17_2044 n=1 Tax=Sphingomonas sp. S17 RepID=F3WXZ6_9SPHN
UPF0434 protein NI18_05290 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
protein of unknown function DUF343
SCN18_14_9_16_R4_B_scaffold_1908_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2259..2870)
DNA (612bp) protein (204aa)
ATP-dependent protease La domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXZ7_9SPHN
DNA, contig: SP629 {ECO:0000313|EMBL:GAN13854.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
ATP-dependent protease
SCN18_14_9_16_R4_B_scaffold_1908_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2874..3770)
DNA (897bp) protein (299aa)
thioredoxin n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037CBB60
Sphingomonas taxi strain 30a NODE_59, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26307.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
thioredoxin
SCN18_14_9_16_R4_B_scaffold_1908_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4051..4899)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003703547
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT07124.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1908_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5058..6593)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037123FF
Sphingomonas taxi strain 30a NODE_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26735.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SulP family inorganic anion transporter
SCN18_14_9_16_R4_B_scaffold_1908_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6593..7288)
DNA (696bp) protein (232aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956, ECO:0000313|EMBL:AJP73067.1}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
carbonic anhydrase n=1 Tax=Sphingomonas elodea RepID=UPI0002631DA8
carbonic anhydrase
SCN18_14_9_16_R4_B_scaffold_1908_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7358..8674)
DNA (1317bp) protein (439aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
histidine kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B499FC
histidine kinase
SCN18_14_9_16_R4_B_scaffold_1908_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8671..9411)
DNA (741bp) protein (247aa)
PhoB family transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B326EC
Response regulator {ECO:0000313|EMBL:EZP51658.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
PhoB family transcriptional regulator
Displaying 11 items

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