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SCN18_14_9_16_R4_B_scaffold_1935

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1935_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..246)
DNA (246bp) protein (82aa)
Peptidoglycan binding domain-containing protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W593_9SPHN
Peptidoglycan binding domain-containing protein {ECO:0000313|EMBL:EZP79370.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
SCN18_14_9_16_R4_B_scaffold_1935_2
unknown

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comp(327..497)
DNA (171bp) protein (57aa)

This feature has no annotations

SCN18_14_9_16_R4_B_scaffold_1935_3
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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679..948
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K9Z6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB33529.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1935_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1058..1792
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I1K6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB19172.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
Crp/Fnr family transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_1935_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1832..2428
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=T0GCA5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49928.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1935_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2472..2801
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0JZP4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB29699.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1935_7
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2859..4121
DNA (1263bp) protein (421aa)
transporter n=1 Tax=Sphingomonas melonis RepID=UPI00038211DB
outer membrane efflux protein
Cation resistance protein CzcC {ECO:0000313|EMBL:KHS45143.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
SCN18_14_9_16_R4_B_scaffold_1935_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4118..5242
DNA (1125bp) protein (375aa)
Metal ion efflux membrane fusion protein family n=12 Tax=Sphingomonadaceae RepID=D4YYE1_SPHJU
Hemolysin D {ECO:0000313|EMBL:KHA65689.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
czcB; metal ion efflux membrane fusion protein family
SCN18_14_9_16_R4_B_scaffold_1935_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5246..8425
DNA (3180bp) protein (1060aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V9J9_SPHWW
CzcA family heavy metal efflux protein
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ABQ68965.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_14_9_16_R4_B_scaffold_1935_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8479..9345
DNA (867bp) protein (289aa)
Acetyl-CoA C-acetyltransferase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GP21_SPHAL
acetyl-CoA acetyltransferase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
Displaying 10 items

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