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SCN18_14_9_16_R4_B_scaffold_5176

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_5176_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..475)
DNA (474bp) protein (158aa)
iron transporter n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003710EDB
fieF; ferrous iron transporter
Ferrous iron transporter {ECO:0000313|EMBL:AIT07678.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_5176_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(472..1065)
DNA (594bp) protein (198aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287B5DF
pyridoxamine 5'-phosphate oxidase
SCN18_14_9_16_R4_B_scaffold_5176_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1226..1969
DNA (744bp) protein (248aa)
Probable transcriptional regulatory protein SUS17_3945 n=1 Tax=Sphingomonas sp. S17 RepID=F3X3C5_9SPHN
Probable transcriptional regulatory protein SP5_018_00080 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_5176_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1975..2463
DNA (489bp) protein (163aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288654D
crossover junction endodeoxyribonuclease RuvC
SCN18_14_9_16_R4_B_scaffold_5176_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2883..3293
DNA (411bp) protein (137aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
Holliday junction DNA helicase RuvA n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4BB
ATP-dependent DNA helicase RuvA
Displaying 5 items

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