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SCN18_14_9_16_R4_B_scaffold_807

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_807_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1557
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036D7006
emrB; multidrug resistance protein B
Multidrug resistance protein B {ECO:0000313|EMBL:AIT07119.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_807_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1654..2757)
DNA (1104bp) protein (368aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Sphingomonas sp. S17 RepID=F3WZF2_9SPHN
thiouridylase
SCN18_14_9_16_R4_B_scaffold_807_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2905..3135
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZF0_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT07681.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_807_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3244..3543
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA753
hypothetical protein
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11943.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCN18_14_9_16_R4_B_scaffold_807_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3768..4025
DNA (258bp) protein (86aa)
Transglycosylase associated family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZE8_9SPHN
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11944.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_807_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4242..4964)
DNA (723bp) protein (241aa)
membrane protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC901
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11945.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
membrane protein
SCN18_14_9_16_R4_B_scaffold_807_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5170..6345
DNA (1176bp) protein (392aa)
secretion protein HylD n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5F0BB
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11946.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
secretion protein HylD
SCN18_14_9_16_R4_B_scaffold_807_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6353..9568
DNA (3216bp) protein (1072aa)
acriflavin resistance protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4F5AE
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26223.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ABC transporter permease
SCN18_14_9_16_R4_B_scaffold_807_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9624..10889
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036A31B2
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11948.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
membrane protein
SCN18_14_9_16_R4_B_scaffold_807_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10969..12066
DNA (1098bp) protein (366aa)
ABC transporter permease n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288B461
ABC transporter permease {ECO:0000313|EMBL:KHA64898.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
ABC transporter permease
SCN18_14_9_16_R4_B_scaffold_807_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12066..12887
DNA (822bp) protein (274aa)
iron ABC transporter ATP-binding protein n=1 Tax=Sphingomonas melonis RepID=UPI0003786913
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26246.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
iron ABC transporter ATP-binding protein
SCN18_14_9_16_R4_B_scaffold_807_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12887..13852
DNA (966bp) protein (322aa)
Mce related family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZE1_9SPHN
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11951.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
mammalian cell entry protein
SCN18_14_9_16_R4_B_scaffold_807_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13864..14445
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZE0_9SPHN
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11952.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
ABC transporter
SCN18_14_9_16_R4_B_scaffold_807_14
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14453..15382)
DNA (930bp) protein (310aa)
Putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSQ0_SPHAL
putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type
Putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type {ECO:0000313|EMBL:ABF53322.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCN18_14_9_16_R4_B_scaffold_807_trna_1
unknown

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15485..15578
DNA (94bp)
transferRNA Ser
SCN18_14_9_16_R4_B_scaffold_807_15
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16246..16599)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS95_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66255.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_14_9_16_R4_B_scaffold_807_16
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16601..17734)
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS96_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66256.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_14_9_16_R4_B_scaffold_807_17
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18003..18773)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3F2CE
Sphingomonas taxi strain 30a NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29498.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_807_18
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18872..19051)
DNA (180bp) protein (60aa)
subtilisin-like serine protease (EC:3.4.21.-)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037321C2
Sphingomonas taxi strain 30a NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29497.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Displaying 19 items

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