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SCN18_14_9_16_R4_B_scaffold_553_7

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 5065..5877

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG67_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 267.0
  • Bit_score: 391
  • Evalue 5.30e-106
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 267.0
  • Bit_score: 382
  • Evalue 5.30e-104
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 265.0
  • Bit_score: 392
  • Evalue 2.50e-106

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGAACCGTCCCTATGCCGAGGTGATCGGCGATCCGATTGCCCATTCGAAATCGCCGCTGATCCACGCTTTCTGGCTCGAAAAGCTCGAGATCGAGGCGGATTATCGCGCGACGCATGTCGTGCCCGACGATCTTGCGCGGTTCGTCGCCGAGCGGCGTGAGGATGCCACGTGGCGCGGGTGCAATGTGACGATCCCGCACAAGATCGCGATGCTCGATCTGGTCGACGATCCGGGCGAGGTGCGCGATTCGATCGGCGCGATGAACACGATCGTGCGCGATTCAGAGGGCCGCGTGTTCGGCACCAACACCGATGCCGCGGGTTTCTATGCGCCGCTGGCCGAGGCCGATCTCACCGGTGCGCCCGTGGTGGTGATCGGGGCCGGCGGGGCGGCGCGCGCGGTGCTGTTCGCGCTGGCGCGTGCCGGGGTCGGCCCGGTGACGATCCTCAACCGCAGCCCGCTCAAGGGCGCGGCGCTGCTCGCGCGATTCGGGTTGAAGGGCAATGCGCTGCCGCTTTCCGCCACGCTCCCGCCGGCGCACTTGCTGGTCAACACCAGCGCGTTGGGGATGAAGGGCCAGCCGCCGCTGGAGATCGATCTGGCGCCGCTGCCCGAAGACGCGATCGTCTATGACATCGTCTACGCCCCGCTCGAAACCGATCTGCTGCAACAGGCCGAGGCGCGCGGGCTGGAGACGATCGACGGGCTGGAGATGCTGATCGGCCAGGCGGCGATGGCGTTCGAGCTGTTCTTCGGCCGCCCTGCCCCGCGCGTCCACGATGCCGAATTGCGCGAGCGGCTGATCGGATGA
PROTEIN sequence
Length: 271
MNRPYAEVIGDPIAHSKSPLIHAFWLEKLEIEADYRATHVVPDDLARFVAERREDATWRGCNVTIPHKIAMLDLVDDPGEVRDSIGAMNTIVRDSEGRVFGTNTDAAGFYAPLAEADLTGAPVVVIGAGGAARAVLFALARAGVGPVTILNRSPLKGAALLARFGLKGNALPLSATLPPAHLLVNTSALGMKGQPPLEIDLAPLPEDAIVYDIVYAPLETDLLQQAEARGLETIDGLEMLIGQAAMAFELFFGRPAPRVHDAELRERLIG*