ggKbase home page

SCN18_14_9_16_R4_B_scaffold_753_10

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 6561..7421

Top 3 Functional Annotations

Value Algorithm Source
Ku family containing protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036C7DD9 similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 288.0
  • Bit_score: 475
  • Evalue 2.90e-131
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 304.0
  • Bit_score: 421
  • Evalue 9.30e-115
Ku protein similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 302.0
  • Bit_score: 412
  • Evalue 8.70e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGCCCGCGCGCGCTTACTGGCAGGGCCAGATCCGTCTGGCGCTCGTTTCGATCCCGGTGGAAATCTATGCCGCCACCAGAAGCGGCGCGACGATCGCCTTCCGCCAGATCCACGAGCCGTCGGGCAAACGCATCCATTATGAGAAAGTGGTCGACGGCATCGGCCCGGTCGATCCGGACGAGATCATGAAGGGGTTCGAGGTCGCCAAGGGCGATTACGTCCTGCTCGACGACGAGGAGATCGCCGGCGTCAAGCTGGAGAGCAAGCGCACGCTGGAGCTGACCCAGTTCGTCGATCTCGCCGATGTCGATGCGATCTATTACGACCGGCCTTATTATGTCGTCCCCGCCGACGATCTGGCCGACGAAGCGTTCATCGTGCTGCGCGAGGCGCTGCGCCGCGCGAAGAAGGTCGGGCTGGGGCAGCTCGCGCTGCGCGGCCGCGAATATGTCGTCGCGCTGAAACCGTGCGGGCGCGGCATGGTGCTCGAAACCTTGCGCTATGCCGATGAGGTCAACAAAGCGGCGGGCTATTTCCGCGATATCCCCGATACCAAGCCCGACGCGGATTTGCTCGATCTGGCCACCACGCTGATCGAGAAGAAAGCGGGCAAGTTCGACGCGTCCGAATTCCACGATCGCTATGTTGACGCCTTGCGCGAGCTGATCGCGCGCAAACGCAAGTCCAAGACCGGCAAGGTCAGCCTCGATCTGGCGGAGGAACGCGCGCCGGCGCGCGGATCGAATGTGGTCGATCTGATGGCGGCGCTCAAGAAATCGCTCGACCGCCCGGCGGCCAAACCCGCCGCATCGACCGCGAAGGCGAAAAAGCCGGCCACGCCGCGCCGCAAGCGGGCCTGA
PROTEIN sequence
Length: 287
MPARAYWQGQIRLALVSIPVEIYAATRSGATIAFRQIHEPSGKRIHYEKVVDGIGPVDPDEIMKGFEVAKGDYVLLDDEEIAGVKLESKRTLELTQFVDLADVDAIYYDRPYYVVPADDLADEAFIVLREALRRAKKVGLGQLALRGREYVVALKPCGRGMVLETLRYADEVNKAAGYFRDIPDTKPDADLLDLATTLIEKKAGKFDASEFHDRYVDALRELIARKRKSKTGKVSLDLAEERAPARGSNVVDLMAALKKSLDRPAAKPAASTAKAKKPATPRRKRA*