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SCN18_14_9_16_R4_B_scaffold_1621_10

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 8702..10471

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V6D3_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 588.0
  • Bit_score: 829
  • Evalue 1.30e-237
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 588.0
  • Bit_score: 829
  • Evalue 3.60e-238
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABQ67849.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 588.0
  • Bit_score: 829
  • Evalue 1.80e-237

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1770
ATGGCCAAAATACTGCACTGCATCGCGCTGGCCGGGATCGGCGTCGCGACATCCAGTTTCTCGCCCGATCGCCCTTTTTCTTCCGTCGCGCTGGACATGCTCGATCCGACGCGCATCGCGGCCTCACTGTGCGGCGGCAGGACCGGCGCGGCGGCGCTGACCCAGCGGCTGATGCTCGCCTCGTCGCTCGCCGGCCCCGCGGGCGGCGCAACGCGCGCGATCCCGCTCTACCCCGATCTCACCACGCGGCTGCCGATCACCACGGCGAACGACGAGGCACGACGCTATTTCGGCCAGGGGCTGGTACTGACCTATGGCTTCAACCATGCCGGCGCGGTGCGCTCGTTCCGCGCGGCGCAGCGGCTCGATCCCGATTGCGCGATGTGCTGGTGGGGCGAGGCGCTCGCGCTCGGCCCGAATATCAACGCGCCGATGGACGATCGCGATCATGGCGCGGCGCTCGCCGCGATCGATCGCGCGCGCGCGCTGCGCGCCGGCGCATCGCCGCTCGAACAGGCGCTGATCGACGCCATGTCGCGCCGCTATTCGCGCGACGCGCAAGCCGATCGCGTGGCGCTCGACGCGGCTTATGCCGATGCGATGCTCGAAGCGGCGCGGCGCTTCCCGGCCGACGACGATATCGCCGCGCTCGCCGCCGAGGCGGTGATGGACACGACGCCGTGGAATTATTGGCAGGACGACAAGCGCACCCCGATCGGGCGCAGCGGCGCGGCGGCGCGGCTGCTCGAAACGGTGATCGCGCGCAATCCCGATCATCTGCAGGCCGCGCACCTCTATATCCACCTGATGGAAAGTGCCGATCCGCGCCGTGCCGAGGCGGCGGCCGACCGGCTGGCGCGCGCGCAGGCACCGAGCGCGGGGCATCTCGTCCATATGCCGGCGCATATCTATCAGTTGCTCGGGCGCCATGCCGATGCGATCCGCCTCAACATCGCCGCCGCGCGATCGGACGAGGCGTTCATCCGCGACACCGACGATCGCAGCCTCGTCCGCTACGGCTATTATCCCCACAACGTCCATTTCATCGTCACCTCGGCGCAAATGGCGGGCGATATGCCCACCGCGCTTGCCGAGGCGCGGCGCCTGCGCACGATCCTCGACCCGGCAACCTCCGCGCGGATCGCGTGGATTCAGGCGATCGACGCGGCGCCCTATCTGGCGATGGCGCAATCCGCCGAGCCGCAGGCGATCCTCGCCATGCCCGCCCCCGACGCGCGGCTGCCCTATGCCGCCGCGATGCGGCATTATGCGCGCGCCGTCGCGCGCGCGCAGCAGCGCGACGCGCGCGGGGTCGCGGCCGAGCTTGCCGCGCTCGGCACGCTGAGCACTTCGAGCGCTTTCGCGGGGATGATCGAACAAGGCGTGCCCGCGCCCGATCTGCTCGCGCTCGCCACGGCGGTGGCGCGCGGGCGGCTCGCTTATGCGCAGCAGCATTATGATGCCGCGGCGGGCTTCTATCGTCAGGCGATCGCGATCGAGGCGCGCATTCCCTATCAGGAGCCGCCTTACTGGTATTATCCGGTCAGCCAGTCGCTCGGCGCGGCGCTGTATCGCGCGGGGCGCTATGACGAGGCGGCGCAGGCGTTTCGCCATGCGCTGGCGCAGACCCCCGCGAACGGCTGGGCGCTCTACGGCCTCGCCGAGAGCGAACGCGCGCGCGGCCACCGCCTCGAAGCTGCGGCGGCGCAACGCGCGCTGCAGCGCGCCTGGCTCGGCAACCGCGGCTGGCTGAAAATGGACCGGCTCTAA
PROTEIN sequence
Length: 590
MAKILHCIALAGIGVATSSFSPDRPFSSVALDMLDPTRIAASLCGGRTGAAALTQRLMLASSLAGPAGGATRAIPLYPDLTTRLPITTANDEARRYFGQGLVLTYGFNHAGAVRSFRAAQRLDPDCAMCWWGEALALGPNINAPMDDRDHGAALAAIDRARALRAGASPLEQALIDAMSRRYSRDAQADRVALDAAYADAMLEAARRFPADDDIAALAAEAVMDTTPWNYWQDDKRTPIGRSGAAARLLETVIARNPDHLQAAHLYIHLMESADPRRAEAAADRLARAQAPSAGHLVHMPAHIYQLLGRHADAIRLNIAAARSDEAFIRDTDDRSLVRYGYYPHNVHFIVTSAQMAGDMPTALAEARRLRTILDPATSARIAWIQAIDAAPYLAMAQSAEPQAILAMPAPDARLPYAAAMRHYARAVARAQQRDARGVAAELAALGTLSTSSAFAGMIEQGVPAPDLLALATAVARGRLAYAQQHYDAAAGFYRQAIAIEARIPYQEPPYWYYPVSQSLGAALYRAGRYDEAAQAFRHALAQTPANGWALYGLAESERARGHRLEAAAAQRALQRAWLGNRGWLKMDRL*