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SCN18_14_9_16_R4_B_scaffold_1650_11

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(9695..10384)

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide deacetylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA10E similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 223.0
  • Bit_score: 286
  • Evalue 2.00e-74
Polysaccharide deacetylase {ECO:0000313|EMBL:GAO55088.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 223.0
  • Bit_score: 289
  • Evalue 3.40e-75
pgdA; polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 215.0
  • Bit_score: 166
  • Evalue 6.60e-39

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGCTGCTCGGCAACCACACTTTCTCGCACAGCTCGCCCAACACCCTGGGCGCCGCGGCCTATGCCGCGGATATCGAACGCGGCGAGCGGATCACCCGCCCGCTGATGAAAGCGCGCGGCAAGAAATTGCGCTGGTTCCGCCACCCCTATCTCGAGACCGGCTCGCCGCGCGCGGTGCGCGACTGGATCAACCGCTGGCTGGCCGACCACGGCTATCGCGTCGCGCCGGTGACGATCGACGCGGAAGATTGGGAATTCGCTGAGCCCTATGACGATGCGATCGCCAAACATGATGTCGCGCGGCAGAAACGCATTCGCGAAACCTATCTCGCTTATACCGCGATGCGCATCAAATGGTCGCAGGAGAGCGCCAAGATATTGTTCGGGCGCGATATCGCACATGTTATGTTGCTCCATTGCACGCGGCTCAACGCCGATACGCTGGATGCCTTGCTGAAACTGCTGCGCGCCGCGCGGCTGCGTCCGGTGACGATCGACGAAGCGATGCGCGACCGTGCCTATCGCACCCGCGATACTTATGCCGAAAAGGACGGCGTGACCTGGCTGGAGCGGTGGGCGGCGACACTCGGTAAAACCTTGCCCAGCGAGGGCGACGAGGACCCGCCGGCCGAAATCCAGGCCGAATATGACCGCGTCGACAATGATCGTGTCTCGCCGCCAAACAAATGA
PROTEIN sequence
Length: 230
MLLGNHTFSHSSPNTLGAAAYAADIERGERITRPLMKARGKKLRWFRHPYLETGSPRAVRDWINRWLADHGYRVAPVTIDAEDWEFAEPYDDAIAKHDVARQKRIRETYLAYTAMRIKWSQESAKILFGRDIAHVMLLHCTRLNADTLDALLKLLRAARLRPVTIDEAMRDRAYRTRDTYAEKDGVTWLERWAATLGKTLPSEGDEDPPAEIQAEYDRVDNDRVSPPNK*