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SCN18_14_9_16_R4_B_scaffold_1650

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1650_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1497)
DNA (1497bp) protein (499aa)
eno1; Enolase (EC:4.2.1.11)
Enolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPW1_9SPHN
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCN18_14_9_16_R4_B_scaffold_1650_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1494..2525)
DNA (1032bp) protein (344aa)
Aminoglycoside phosphotransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9J2_9SPHN
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ENY80383.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
aminoglycoside phosphotransferase
SCN18_14_9_16_R4_B_scaffold_1650_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2504..3631)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYQ1_9SPHN
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:KGB53212.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1650_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3750..4652)
DNA (903bp) protein (301aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX19_9SPHN
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:ENY83000.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCN18_14_9_16_R4_B_scaffold_1650_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4764..5186
DNA (423bp) protein (141aa)
MarR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPK4_9SPHN
Transcriptional regulator of marR family {ECO:0000313|EMBL:GAO55023.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
MarR family transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_1650_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5183..5740
DNA (558bp) protein (186aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
Isopropylmalate isomerase small subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYP6_9SPHN
SCN18_14_9_16_R4_B_scaffold_1650_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5801..7204)
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
leuC1; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAA0_9SPHN
SCN18_14_9_16_R4_B_scaffold_1650_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7201..8379)
DNA (1179bp) protein (393aa)
succinyl-CoA:(R)-citramalate CoA-transferase (EC:2.8.3.-)
Succinyl-CoA:(R)-citramalate CoA-transferase {ECO:0000313|EMBL:ABD24623.1}; EC=2.8.3.- {ECO:0000313|EMBL:ABD24623.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Succinyl-CoA:(R)-citramalate CoA-transferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GC00_NOVAD
SCN18_14_9_16_R4_B_scaffold_1650_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8456..9034)
DNA (579bp) protein (193aa)
NADPH-dependent FMN reductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPV5_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCN18_14_9_16_R4_B_scaffold_1650_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9090..9605)
DNA (516bp) protein (172aa)
Transcriptional regulator, MarR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GS02_SPHAL
MarR family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCN18_14_9_16_R4_B_scaffold_1650_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9695..10384)
DNA (690bp) protein (230aa)
polysaccharide deacetylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA10E
Polysaccharide deacetylase {ECO:0000313|EMBL:GAO55088.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
pgdA; polysaccharide deacetylase
SCN18_14_9_16_R4_B_scaffold_1650_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10573..11883)
DNA (1311bp) protein (437aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Sphingobium sp. AP49 RepID=J2WPL0_9SPHN
N-acetylglucosamine-6-phosphate deacetylase
SCN18_14_9_16_R4_B_scaffold_1650_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11883..12227)
DNA (345bp) protein (115aa)
Putative phosphosugar isomerase n=1 Tax=Sphingobium sp. AP49 RepID=J2DPL1_9SPHN
Putative phosphosugar isomerase {ECO:0000313|EMBL:EJK84952.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
glutamine-fructose-6-phosphate transaminase (isomerizing)
Displaying 13 items

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