ggKbase home page

SCN18_14_9_16_R4_B_scaffold_1038_14

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(13454..14773)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 444.0
  • Bit_score: 433
  • Evalue 2.80e-118
two component sensor histidine kinase transcriptional regulatory protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630CEB similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 435.0
  • Bit_score: 465
  • Evalue 4.70e-128
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 439.0
  • Bit_score: 424
  • Evalue 3.40e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGACGCGCTGGTCCCTTCGCGCTCGAATGCTGGCATTATCCGGTATGGCGATCCTGGCGGCGCTAGCCATCGGCACATGGTTGATCGCGGGCATCCTCACACATTTTGTTACCGAAGGCCTGGACCAACGGCTGGACGCGCAGCTTGCGATGATGGCGACAGCTGTGCACGCCGACGGATCGGTGGATCGCGCGAAAATCGCGCAACGCGCGAGTATCATGAGGCTTGGCCCGGAGTGGCGCTGGCGTATTGTTGGCCCCGATGGTGCTGTGGAGTCGGCGGACTTTCCCACGCTCGATCCAAGACCGCCTCATCCTCCGCAGCCGGATTGTGCCCTGAAAGACGGGCCTGCTCCCCCTCCGGCTCCGCGCGAGGGCGAGGATCGAGAGGGGCATGCCCATGCCCGGCAAGCCGTCATCGCAACCAGCCGAGGGCCAGTAACGCTGATCGCCGCCGCGCCCTCGCAAGTGATCGCCCGTCCCATCCGCGCCGCGCTCGTGCCGTTGCTTATCGTCATCGCCGTCCTTGCGATTCTCTTCGCGCTGGCGGCCCTCCTGCAGCTTCGCTTCGGCCTGCGTCCAATATTGGCGCTGCGCGACCAAGTCGGCGCTATCCGCCACGGCACGCGGACGACGGTCGACGAAGACCAGCCCGCCGAGCTAAAGCCGCTCGCGGTCGAGCTCAACGCGCTGGCGAGCGAGAGTGCTGCGGCGCTGACTGCAGCGCGCGCCTCCGCCGCCAACCTCGCCCACGCGCTGAAGACGCCCGTGACGACGCTCGCCCTGACGGTTGGCGACAATCCCGAGGCAGCGGCGCAGATCGAACGGATCGAAGGCGTCATCCGCCACCATCTTGCGCGGGCGCGAACCGTAGCGGTTGCGCATCGCGTGAAGACGCTTCTCGAACCGGTCGTTTCCGATATCGTCGCGGTAATCGGCTCCCGCCGGCACGATGTCGCTGTCACGATCGATGTTCCAGCCAAAATCGCCGTCTCGCTCGATGCGCATGACCTGTCCGAGATCCTGGGCAATATCCTCGACAATGCCTCGCGCCATGCGCGTTCGTCGGTTGTCGTAATCGCACGGGCCGAGGATCGGCGGGTCATCCTGTCGATCGAAGATGACGGGCCGGGCATACCGGCGGATCGGCGAGAACAGGCGATGCAACGCGGGGTCCGGTTCGACGAGGCGCCGCAGAGCGACGGGTTCGGCCTGGCAATCGTGCGCGAGCTACTCGCGCTTCATGGTGGCGCACTGGAACTGCGGGAGGGTGACCGGGGAGGGCTGTGCGTGCTCATGTATCTTGTGAAAGCGACGTGA
PROTEIN sequence
Length: 440
MTRWSLRARMLALSGMAILAALAIGTWLIAGILTHFVTEGLDQRLDAQLAMMATAVHADGSVDRAKIAQRASIMRLGPEWRWRIVGPDGAVESADFPTLDPRPPHPPQPDCALKDGPAPPPAPREGEDREGHAHARQAVIATSRGPVTLIAAAPSQVIARPIRAALVPLLIVIAVLAILFALAALLQLRFGLRPILALRDQVGAIRHGTRTTVDEDQPAELKPLAVELNALASESAAALTAARASAANLAHALKTPVTTLALTVGDNPEAAAQIERIEGVIRHHLARARTVAVAHRVKTLLEPVVSDIVAVIGSRRHDVAVTIDVPAKIAVSLDAHDLSEILGNILDNASRHARSSVVVIARAEDRRVILSIEDDGPGIPADRREQAMQRGVRFDEAPQSDGFGLAIVRELLALHGGALELREGDRGGLCVLMYLVKAT*