ggKbase home page

SCN18_14_9_16_R4_B_scaffold_1356_4

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 2539..5313

Top 3 Functional Annotations

Value Algorithm Source
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 959.0
  • Bit_score: 1431
  • Evalue 0.0
ileS; isoleucine--tRNA ligase (EC:6.1.1.5) similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 957.0
  • Bit_score: 1372
  • Evalue 0.0
isoleucyl-tRNA synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B72CE8 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 919.0
  • Bit_score: 1420
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2775
ATGGCTGACGCATCCGATACCCCGAAGCGCGACTGGCGCGACACCGTCTTCCTGCCGAAGACCGACTTTCCTATGAAAGCCGGCCTGCCGCAGAAGGAACCGGCGATTCTGGAACGCTGGCAGAAGCTGGGCCTGTACCAGCGGCTGCGCGAGCAGCGTGCCGGGCGCGAGAAGTTTATTCTCCATGACGGCCCGCCCTATGCCAATGGCGATATGCATATCGGCCATGCGCTCAACCATATCCTCAAGGACATGGTGGTCCGTACCCAGTCGTTGCTGGGCAAGGACGCGCCTTATGTTCCCGGCTGGGATTGCCACGGCCTGCCGATCGAATGGAAGGTCGAGGAAGAATATCGCAAGAAGAAGCGCAACAAGGACGAGGTGCCGGCGCGCGAATTCCGCGCCGAATGCCGCGCCTATGCGCAGCACTGGGTGAACACCCAGCGCGAGCAGCTCAAGCGGCTCGGCATCAACGGCGATTGGGACAAGCCCTATCTGACGATGGATTTCGCGGCGGAGGCGACGATCGTCGCCGAGCTGATGAAATTCGCCGAAACCGGCCAGCTCTATCGCGGCGCCAAGCCGGTGATGTGGTCCCCGGTCGAAAAGACCGCCTTGGCCGAGGCCGAGGTGGAATATGAGGACATCACCTCGACCCAGATCGACGTGGCGTTCGAGATCGTCGAGGCGCCGGGCGCGCCCGAACTGGTCGGCGCGCATGCGGTGATCTGGACGACGACGCCGTGGACGATACCGGTCAATCAGGCGTTGGCCTATGGGGCCGAGATCGATTACGTCGCGCTCGACCTCGATGGCACGCGGTATCTGGTTGCCGAGCAATTGATCGGTCCCTTCCAAGCACGGGTCGGCCGGAGCGGTGGTGTCGTATGGCGCGGGACTGGCGCGCAACTCGCCGGCGCGGTCGCGCGGCACCCGATGCACCAGCTTGGCGGTTTCTTCGCCAAGCCGCGTCCGTTCCTCGCCGGCGATTTCGTTACCACCGACGCGGGCACCGGGCTCGTCCATATGTCGCCGGATCACGGCGAGGACGATTTCGAGCTGTGCAAGGCGAATGGCATCGATCCGGTGTTCGCGGTCGATGCGGGCGGCTTCTACCGCGAGGATTGGGCGTGGCTCGGCGGGCAGGGCAGCGTCATCAACAAGAAGTTCACCGCCAGCGACGGCCCGATCTGTTCGGACCTGCGCGCGGCCGGCGCGTTGCTCGCTGCGACCGACGATTTCGTCCACAGCTACCCGCATTCGTGGCGCTCCAAGGCGAAGGTGATCTTCCGCTGCACCCCGCAGTGGTTCATCGCGGTCGACCGGCCGATCGAGGGCGGCGCGACCCTGCGCGAAACCGCGGTCGCCGCGATCGCCGCGACGCGCTTCGTTCCCGAAAAGGGTCGTAACCGCATCGGCGCGATGGTCGAGGGCCGCCCGGACTGGGTGATCTCGCGCCAGCGCGCGTGGGGCGTGCCGATCGCCTTGTTCGTCGATCGCAAGAGCGGGCAATATCTGTGCGATCCGGCGGTCAATGCGCGGATCGTAGAAGCCTTCCGTGCCGAGGGCGTCGATGCGTGGAGCGAGGAAGCGGCCCCCGCGCTGCTCGGCCCGGATTACGATCCGGCCGATTACGAGCGCGTTACCGACATTCTCGACGTGTGGTTCGATTCGGGCTGCACCCACGCCTTCGTGCTCGAAAGCGGGCGCTGGCCCGAATTGCACTGGCCGGCGGATCTGTATCTCGAAGGGTCGGACCAGCATCGCGGCTGGTTCCAGTCGTCGCTGATGGAAAGCTGCGGCACGCGGGGTCGTGCGCCCTATAATGCGGTGCTGACCCACGGCTTCACGATGGACGCCAAGGGCATGAAAATGTCCAAGTCGCTCGGCAACACGGTCAATCCGCTCGACCTGATGAAGGAATATGGCGCGGATATCCTGCGCCTGTGGGCGCTGTCGGTCGATTTCACCGAGGATCACCGCATCGGCAAGGAGATCCTCGCCGGGGTCGCGGATCAATATCGCAAGCTGCGCAACACCTTCCGCTACCTGCTCGGCGCGCTCGACGGGTTCGACGAGGCCGAGCGGCTGCCGGTATCCGAATGGCCCGAGCTGGAGCGCTATATGCTCCACCTCGTCCACGCGCTCGACAAGCAGCTTCGTCAGGCGATCGCTGATTTCGACTTCAACAGCTACACAAGGTTGCTGAGCGATTTCGCGAACGAGGATCTGTCGGCGTTCTTCTTCGATATCCGCAAGGATTCGCTCTATTGCGACGCGCATACGGATACGACGCGGCGCGCCTATCGCACGATGCTCGATGTGCTGTTCCACGCGCTCGTGCGCTGGGCGGCACCGGTGCTGACCTTCACCGCCGAGGAAGTGTGGCAGACGCGCTTCCCGAGCGAGGACGGGTCGGTGCATTTCCTCGACTGGCCCGAACTGCCCGCCGAGGCCGGCGAGGACGTCAGCCAGCGCTGGCTGGCGATCCGTGCGCTGCGCGTGCGGGTGACCGAGGCGATCGAGCCGCTGCGGCGCGAGAAGATCGTCCGTTCGAGCCTCGAGGCCGATGTGACGGTGCCCGAATTGCCGCTCGATGCCGATGCTCTGGCGGAAGCGTTCATCGTGGCGAAGGTATCGCCCGGCGATGAAGTGACCGTGACGCGCACCGATTATCACAAATGCGGCCGCTGCTGGCGGCTGCTGCCGGAAGTGACCGAGGATGACGGTTTGTGCGCGCGCTGCGCTGCGGTGGTCGGCGAGGTGGACGCGTGA
PROTEIN sequence
Length: 925
MADASDTPKRDWRDTVFLPKTDFPMKAGLPQKEPAILERWQKLGLYQRLREQRAGREKFILHDGPPYANGDMHIGHALNHILKDMVVRTQSLLGKDAPYVPGWDCHGLPIEWKVEEEYRKKKRNKDEVPAREFRAECRAYAQHWVNTQREQLKRLGINGDWDKPYLTMDFAAEATIVAELMKFAETGQLYRGAKPVMWSPVEKTALAEAEVEYEDITSTQIDVAFEIVEAPGAPELVGAHAVIWTTTPWTIPVNQALAYGAEIDYVALDLDGTRYLVAEQLIGPFQARVGRSGGVVWRGTGAQLAGAVARHPMHQLGGFFAKPRPFLAGDFVTTDAGTGLVHMSPDHGEDDFELCKANGIDPVFAVDAGGFYREDWAWLGGQGSVINKKFTASDGPICSDLRAAGALLAATDDFVHSYPHSWRSKAKVIFRCTPQWFIAVDRPIEGGATLRETAVAAIAATRFVPEKGRNRIGAMVEGRPDWVISRQRAWGVPIALFVDRKSGQYLCDPAVNARIVEAFRAEGVDAWSEEAAPALLGPDYDPADYERVTDILDVWFDSGCTHAFVLESGRWPELHWPADLYLEGSDQHRGWFQSSLMESCGTRGRAPYNAVLTHGFTMDAKGMKMSKSLGNTVNPLDLMKEYGADILRLWALSVDFTEDHRIGKEILAGVADQYRKLRNTFRYLLGALDGFDEAERLPVSEWPELERYMLHLVHALDKQLRQAIADFDFNSYTRLLSDFANEDLSAFFFDIRKDSLYCDAHTDTTRRAYRTMLDVLFHALVRWAAPVLTFTAEEVWQTRFPSEDGSVHFLDWPELPAEAGEDVSQRWLAIRALRVRVTEAIEPLRREKIVRSSLEADVTVPELPLDADALAEAFIVAKVSPGDEVTVTRTDYHKCGRCWRLLPEVTEDDGLCARCAAVVGEVDA*