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SCN18_14_9_16_R4_B_scaffold_1356

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1356_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..646)
DNA (645bp) protein (215aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AYM0_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJR64485.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
putative acyl-CoA dehydrogenase
SCN18_14_9_16_R4_B_scaffold_1356_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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724..1449
DNA (726bp) protein (242aa)
metallophosphoesterase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000361E479
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:EZP57291.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
metallophosphoesterase
SCN18_14_9_16_R4_B_scaffold_1356_3
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1446..2423
DNA (978bp) protein (326aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
riboflavin biosynthesis protein RibF n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA173
riboflavin biosynthesis protein RibF
SCN18_14_9_16_R4_B_scaffold_1356_4
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2539..5313
DNA (2775bp) protein (925aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ileS; isoleucine--tRNA ligase (EC:6.1.1.5)
isoleucyl-tRNA synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B72CE8
SCN18_14_9_16_R4_B_scaffold_1356_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5313..5816
DNA (504bp) protein (168aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003725DC0
peptidase A8
SCN18_14_9_16_R4_B_scaffold_1356_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5816..6223
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381B8E1
Sphingomonas taxi strain 30a NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29040.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1356_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6343..7539)
DNA (1197bp) protein (399aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:EZP54848.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EZP54848.1};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
cystathionine beta-lyase (EC:4.4.1.8)
cystathionine beta-lyase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036583C9
SCN18_14_9_16_R4_B_scaffold_1356_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7536..8372)
DNA (837bp) protein (279aa)
sseA; 3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB0AA
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1356_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8467..8829
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002DE8C1A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70158.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_14_9_16_R4_B_scaffold_1356_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8954..9397
DNA (444bp) protein (148aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Sphingomonas sp. S17 RepID=F3WTP9_9SPHN
7-cyano-7-deazaguanine reductase
SCN18_14_9_16_R4_B_scaffold_1356_11
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9521..11806
DNA (2286bp) protein (762aa)
glycosyl transferase family 1 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B449D8
Glycosyl transferase family 1 {ECO:0000313|EMBL:AIT06385.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
glycosyl transferase family 1
SCN18_14_9_16_R4_B_scaffold_1356_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11849..12913
DNA (1065bp) protein (355aa)
glycosidase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003748F6D
DNA, contig: SP617 {ECO:0000313|EMBL:GAN13333.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
glycosidase
Displaying 12 items

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