ggKbase home page

SCN18_14_9_16_R4_B_scaffold_1300_7

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 7241..8842

Top 3 Functional Annotations

Value Algorithm Source
betA; choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 529.0
  • Bit_score: 475
  • Evalue 1.20e-131
Choline dehydrogenase-like flavoprotein n=1 Tax=Caulobacter crescentus OR37 RepID=R0ESN6_CAUCE similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 530.0
  • Bit_score: 833
  • Evalue 6.10e-239
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:ENZ83992.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 530.0
  • Bit_score: 833
  • Evalue 8.50e-239

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1602
GTGGAGCGCTACGATTACATCATCGTCGGTGCGGGCGCAGCGGGGTGCGTGCTGGCCTATCGCCTGAGCGAAGACCCGGCGAACCGGGTCTGCGTGATCGAGGCCGGGCCGCGCGATACCCATCCGTTCATCGCGATGCCCAAGGGGCTGGCGAAGGTGATGGCCGATCCCAAACATCTCTGGGCGCATGCCAGCCAGCCCGAGGCGAGCACCGCCGGCCAATCCGAAATGTGGGTGCGCGGGCGCGTGCTCGGCGGATCGAGCTCGATCAACGGGATGATGTGGGTGCGCGGCCAGCCGGCCGATTTCGACGCGCTCGCCGAACTGACCAGCGACGACTGGAATTGGGAGCATATCGGCGCGGCCTATGCCGCGCTCGAACACCACGAACTCGGCGCCGCCCCGACGCGCGGCGCGAGCGGGCCGCTCAGGGTGACGATGCCGACGCTGCGTGACGCCTTGTCCGAGGCGCAGATCCGCGCCGGCGAGGCAATGGGCTGGCCGCGCAAACAGGACGTGAACATTCCCGACAACGACGACGGGATCGGCTATGCCCCGCGCACGATCGCCGGCGGCAAGCGGCAGAGCGCGGCGACCGCCTTCCTGCGCCCGGCCGAGCGGCGCGCCAATCTGACCGTGCTGACCGATTGCACGGTGGATCGCGTCATCTTCGACGGCCAGCGCGCCAGCGGGGTCGAGCTGCTGCGCGGCGGCCGGCGCGAGACGATCGGCGCGGCGCGCGAGGTGATCCTGTGCGGCGGCGCGCTGGCGACCCCCGGCATCCTCGAACGATCCGGCATCGGCGACGCGCGGCGACTCGCGGAGCTCGGCATCCCGCTGGTCCACGATAATCCCGAAGTCGGCGAAGGGCTGATCGAGCATCGCGGGCTGATCATGCAGTGGAAGCTCACCCGCGATCTTTCGCAGAACAAGCAATTCCACGGCTGGCGGCTGCTCCGCGCGACCGTGCGTTACTATCTGACGCGCGGCGGGCCGATGTCGGCCGCCGCCTATGAGATCGGCGGGTGGTTTCGCACGCGGCCGGGGCTCAACCGGCCCGATGCGCAGGTGCTGGTCGCGCCCTTCTCGTTCGATTTCGCGAAGCAGCGGCAGGATGTCGAACGCTTTCCGGGGATGAGCGTGGTCGTCTATCCGCTGCGCCCGACCTCGCGCGGCAGCATCCATATCGCGACGCGCGATCCCGATGCGGCGGCGAGCTTCCAGCCCAATTATCGCGCCAGCGACGCCGATCGCCAGTCGATGATCGGGGCGGTTCGCGTGATTCGCGATTATGTCCGCCAGGCGCCGCTCGGCGAACTGGTCGGCGAGGAAACCATGCCCGGCGCCGCGGTCGCCAGCGATGCGCAGATTCTCGAGGCCTATGATCGTTTCGGCACCTGCGGCTATCACGCCGTCGGCAGTTGCCGGATGGGCAAGGACGATGCTTCGGTGATCGACCCGCAGCTCAACGTGCGCGGCGTCTCCGCATTACGCATCATCGACACCTCGGTCATGCCATTGATTCCGGCGGGAAATACCCAGGGCCCGACGATGGCGATGGCGTGGCGCGCGGCCGATCTGATCCTCGCCGCGAACGGCTGA
PROTEIN sequence
Length: 534
VERYDYIIVGAGAAGCVLAYRLSEDPANRVCVIEAGPRDTHPFIAMPKGLAKVMADPKHLWAHASQPEASTAGQSEMWVRGRVLGGSSSINGMMWVRGQPADFDALAELTSDDWNWEHIGAAYAALEHHELGAAPTRGASGPLRVTMPTLRDALSEAQIRAGEAMGWPRKQDVNIPDNDDGIGYAPRTIAGGKRQSAATAFLRPAERRANLTVLTDCTVDRVIFDGQRASGVELLRGGRRETIGAAREVILCGGALATPGILERSGIGDARRLAELGIPLVHDNPEVGEGLIEHRGLIMQWKLTRDLSQNKQFHGWRLLRATVRYYLTRGGPMSAAAYEIGGWFRTRPGLNRPDAQVLVAPFSFDFAKQRQDVERFPGMSVVVYPLRPTSRGSIHIATRDPDAAASFQPNYRASDADRQSMIGAVRVIRDYVRQAPLGELVGEETMPGAAVASDAQILEAYDRFGTCGYHAVGSCRMGKDDASVIDPQLNVRGVSALRIIDTSVMPLIPAGNTQGPTMAMAWRAADLILAANG*