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SCN18_14_9_16_R4_B_scaffold_1300

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1300_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1212)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EQ70_CAUCE
TonB-dependent receptor
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCN18_14_9_16_R4_B_scaffold_1300_2
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1566..2738)
DNA (1173bp) protein (391aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5D6_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO53112.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCN18_14_9_16_R4_B_scaffold_1300_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2746..3912)
DNA (1167bp) protein (389aa)
nonspecific lipid-transfer protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0586
nonspecific lipid-transfer protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCN18_14_9_16_R4_B_scaffold_1300_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3909..4310)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0585
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCN18_14_9_16_R4_B_scaffold_1300_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4307..5536)
DNA (1230bp) protein (410aa)
Cytochrome P450 n=1 Tax=Caulobacter crescentus OR37 RepID=R0D619_CAUCE
cytochrome P450
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCN18_14_9_16_R4_B_scaffold_1300_6
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5550..7049)
DNA (1500bp) protein (500aa)
fatty-acid--CoA ligase (EC:6.2.1.-)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Caulobacter crescentus OR37 RepID=R0ESP2_CAUCE
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCN18_14_9_16_R4_B_scaffold_1300_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7241..8842
DNA (1602bp) protein (534aa)
betA; choline dehydrogenase (EC:1.1.99.1)
Choline dehydrogenase-like flavoprotein n=1 Tax=Caulobacter crescentus OR37 RepID=R0ESN6_CAUCE
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:ENZ83992.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
SCN18_14_9_16_R4_B_scaffold_1300_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8973..11423
DNA (2451bp) protein (817aa)
TonB-dependent receptor n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0581
Uncharacterized protein {ECO:0000313|EMBL:ENZ83994.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
TonB-dependent receptor
SCN18_14_9_16_R4_B_scaffold_1300_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11475..12164)
DNA (690bp) protein (230aa)
transcriptional regulator n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0580
transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCN18_14_9_16_R4_B_scaffold_1300_10
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12269..13126
DNA (858bp) protein (286aa)
alpha/beta hydrolase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD057F
alpha/beta hydrolase fold protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCN18_14_9_16_R4_B_scaffold_1300_11
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13123..13341
DNA (219bp) protein (73aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V4Z7_SPHWW
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABQ67363.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Displaying 11 items

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