ggKbase home page

SCN18_14_9_16_R4_B_scaffold_1304_16

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(12117..13328)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D5DB82 related cluster n=1 Tax=unknown RepID=UPI0003D5DB82 similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 402.0
  • Bit_score: 546
  • Evalue 1.90e-152
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ETI58617.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 402.0
  • Bit_score: 546
  • Evalue 2.70e-152
cyclic nucleotide-binding protein similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 417.0
  • Bit_score: 288
  • Evalue 2.70e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
CGTCATGATGCGGCGATCGGCCTCACTTATGGCGACAGTCGCTGGCATTATGATCGCCAGATGGCGACCGCGCTGCTCGACGTGAGCGGTCAGGCGCGGCGGCTCGACGTCGTGGCGCTCGACGCGGCCGGGCGGGAGGCCGGGCGGCTGACCGACAATGGCTTTCTGCGGTACGGATCCTTGTTCGATTCCGTCGCCATGAAGACGTCCAATGTCGCGCTGTATGTTGCGGACGAATGGGCGATCGCACCGCACTGGCGGGTCGATCTCGGCCTGCGCTGGGAGCGGATCCGGATCGGCGGCAATGTGATGAATTCAAAGGCGTTCGATCTGGGCGACCCGGCCACGCTGGCCGATGATGCGGTGCTCGGCCCGACCGGCATCACCCAGCCGATCGACCGCCGGTTCACCGGGCTCAACTGGACGGCCGCCGTCAATTTCAATCCCATGCCCAGCCTCGGCCTGTTCGCGCGGCTGACCCGGATCGCGAGATTGCCGAGCGGCAGCGAATTCTACGCCTCGCCGAAGCGGACCGACGAGGCCATCGTGCCGATCATCATGGCCGAGGCCGGCATCATCGCCAAGCGACCGCATTGGGCGCTTTCCGCCACCGGTTTCGCGACCCATTTCGCGCGCCTGCCGTTCACCGATTATCGTTTCGACACCGCGTCCAACAGCTATGTCGAACGCACGTCGATCGCGGATACCTCGACGATCGGGCTGGAGCTGACCGGCCATGCCGATCTGGTCGGCCCGTTGCAGCTCGACGTGCAGGCGACGCTGCAGGATCCCCGCTATCTCAACTTCAGCTATGTCGAGCTGTCCAGCGGCCAGCCGGTGACACGCACCGTCACCGGCAATCAGCTCGTCCGCGTGCCGCGGGTTTCGCTCCGCCTCGCGCCGAGCCTCAATCTCATCGGCGGGAAGCTGCGCATCGGCGCCGAGCTGATGCATTATTCCAGCCGGTTCGCGGATATCGCCAATAGCCAGCGCCTGCCCGCCTTCTCCTTGCTCAACGCCAGCGTGGACGCGGCGCTCAACGATCGGGTCAGCCTTGCGCTCAACGCGACCAACCTCACCAACGCACTCGGGCTCACCGAAGGCAATCCGCGCGTGGGATCGTTCGACGCCGGCGGCATGAGCAACAGCTATTTCCTCGCCCGGCCGGAATTCGGACGCAGCATCCGCGCCACGCTCAGCCTGTCTTATTGA
PROTEIN sequence
Length: 404
RHDAAIGLTYGDSRWHYDRQMATALLDVSGQARRLDVVALDAAGREAGRLTDNGFLRYGSLFDSVAMKTSNVALYVADEWAIAPHWRVDLGLRWERIRIGGNVMNSKAFDLGDPATLADDAVLGPTGITQPIDRRFTGLNWTAAVNFNPMPSLGLFARLTRIARLPSGSEFYASPKRTDEAIVPIIMAEAGIIAKRPHWALSATGFATHFARLPFTDYRFDTASNSYVERTSIADTSTIGLELTGHADLVGPLQLDVQATLQDPRYLNFSYVELSSGQPVTRTVTGNQLVRVPRVSLRLAPSLNLIGGKLRIGAELMHYSSRFADIANSQRLPAFSLLNASVDAALNDRVSLALNATNLTNALGLTEGNPRVGSFDAGGMSNSYFLARPEFGRSIRATLSLSY*