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SCN18_14_9_16_R4_B_scaffold_1304

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1304_1
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..164
DNA (162bp) protein (54aa)
AraC family transcriptional regulator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YIE9_9PROT
AraC family transcriptional regulator {ECO:0000313|EMBL:EKM98646.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
transcriptional regulatory protein AraC family
SCN18_14_9_16_R4_B_scaffold_1304_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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224..1531
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003793067
MATE efflux family protein {ECO:0000313|EMBL:EGD59222.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
MATE efflux family protein
SCN18_14_9_16_R4_B_scaffold_1304_3
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1528..2217)
DNA (690bp) protein (230aa)
PREDICTED: methylesterase 8-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C10E3A
Hydrolase {ECO:0000313|EMBL:EYR77550.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hydrolase
SCN18_14_9_16_R4_B_scaffold_1304_4
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(2329..3252)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BH34_CHLPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL65711.1}; Flags: Precursor;; TaxID=290317 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
SCN18_14_9_16_R4_B_scaffold_1304_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3340..3969)
DNA (630bp) protein (210aa)
amino acid transporter n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB93D
Scaffold2, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34029.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
amino acid transporter
SCN18_14_9_16_R4_B_scaffold_1304_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4121..4447
DNA (327bp) protein (109aa)
Regulatory protein ArsR n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UFA1_SINMW
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:ABR62331.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCN18_14_9_16_R4_B_scaffold_1304_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4444..4911
DNA (468bp) protein (156aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S0R2_RHIET
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AGS20941.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCN18_14_9_16_R4_B_scaffold_1304_8
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4946..5716
DNA (771bp) protein (257aa)
UPI0003CF2FDF related cluster n=1 Tax=unknown RepID=UPI0003CF2FDF
Uncharacterized protein {ECO:0000313|EMBL:ESW83689.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1304_9
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5713..5934
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSN9_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74247.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_14_9_16_R4_B_scaffold_1304_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5894..6316)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W797_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95338.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1304_11
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(6328..7092)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036EDA0D
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_14_9_16_R4_B_scaffold_1304_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7089..7637)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000362BFF2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79189.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCN18_14_9_16_R4_B_scaffold_1304_13
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7740..8783)
DNA (1044bp) protein (348aa)
UPI0003CFE02E related cluster n=1 Tax=unknown RepID=UPI0003CFE02E
VacJ-like lipoprotein {ECO:0000313|EMBL:EZP57397.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
vacJ; surface lipoprotein
SCN18_14_9_16_R4_B_scaffold_1304_14
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8940..10241)
DNA (1302bp) protein (434aa)
ammonium transporter n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039F62CB
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
ammonium transporter
SCN18_14_9_16_R4_B_scaffold_1304_15
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10472..12109
DNA (1638bp) protein (546aa)
Na+/H+ antiporter n=1 Tax=Sphingomonas sp. LH128 RepID=J8VBK9_9SPHN
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34405.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
sodium:proton antiporter
SCN18_14_9_16_R4_B_scaffold_1304_16
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12117..13328)
DNA (1212bp) protein (404aa)
UPI0003D5DB82 related cluster n=1 Tax=unknown RepID=UPI0003D5DB82
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ETI58617.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
cyclic nucleotide-binding protein
Displaying 16 items

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