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SCN18_14_9_16_R4_B_scaffold_1508_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1294..5025)

Top 3 Functional Annotations

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Value Algorithm Source
DNA transfer and F pilus assembly protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP72_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 1246.0
  • Bit_score: 1939
  • Evalue 0.0
DNA transfer and F pilus assembly protein {ECO:0000313|EMBL:CCA93224.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 1246.0
  • Bit_score: 1939
  • Evalue 0.0
DNA transfer and F pilus assembly protein similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 1246.0
  • Bit_score: 1939
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3732
ATGATGCGTCGGATCCTTCGCGCCGTTGTCACGGTCGCCGCATTGCTCGCCGCCTCGCCGGCCTTTGCCGTCGATACGAGCTTCTACACCTATGACGGCTTCGCCGAGACGGTAGATGCATTCCGTCTCGTCGCGATGATCTTTGCCGACCCGCGTTACGAGACGCTGGTCGTGGTGATCGCGACGGTCGGGATTGCGGTGGGAGCGACGCTGACCGCCATTCGTGGCCAGGGTATGGGGCTTGTCGCCTTCGGCTTTCAGATGCTGGTCGGCATCGGCCTGTTCGTCGGTATGATCGCGACCACCGGGACGGTCCACGTCTATGACAAGGTGCGCAACGCCTATCAGCCGGTCGGCGGCGTCCCCAATCTGCTCGTGCTGGTCGCCGGCACGACCAACCTGATGGAGCGCGCCCTGGTCGAGACGATCGACGACAACACGCTCGATCCGGATTCCAAGATCGAGTTCGGCGCCGGGGGGCACACGTTCGACCTGTTCTTCAATGCCGTCGCGCCGCGTGGCCCGATGACCGACACCTTCCTTGATGCAACGATCAAGGACTATGTCCGGCAATGCTATCCGGTCGCGCGCGTGTCGCCGGCTTACGGCATCGACGATGACAAGTTGTTCCGCACGACAACCGATCTGCCAGCCGCGTTCGCAGCGATGGCGGGACCTGCGACCTTCAGCACGGTCTATACGGCGGCGGACAAGGGCGGCACGACGAAGAGCTGCGACGAGTCTTGGCAATATATTTCTGACAGGCTCTCCGATCCGACCTTGTTCGACGATTACACCAGGCAGGTTTGCCTGCGGACGGGCTTCGACGCGACCGATGCCAATCAGCTCACTCGCTGCCGCGCCCAGCTCGGCGAGGTGGGCGGCATGATGATGGGCTCTCCGCTGTCGCTTCAGGCATTCATGACAGATGTCCTGCTCGGCAACACCGTGGGCGACGTCCTGTTCGAGGATAGCCCGGCAACAGCGGCCCGGGTCATGGCCAATCGCGCCGTAATGTCGAGCGGTCTTGCCACGATGTCGGTTGCAAACGAATGGATGCCGACGATCCGCGCGGTCGTATTCGGCATCCTGCTGTTCATGATCCCGATCGCGCTTCTGTTCATCCTGACGCCGATCAACCTTCGGGTCATGAGCTTCGCGCTTGGGCTGTTCGTGTTCGTCGCCTTGTGGGGCGTGATCGATGCCGGCATTTACCAGCTTACCCTTGGGCGCGCGATGGGCGCGCTTGCCGAGATGCGCTCGAACGCCAACGGCGCCAACGCCTGGCTTCTCGCCCCTTCTTCCGCGCAAAAGGCCCTTGCGATCTTCGGCAGCTTCCGCACGGCGGCGGCGGGCCTGGCGGGCGCGTTCGTGTTCACGGTGTTCCGGTTCTCGGGGAATGTCTTCACGGCGTTCACCAGCGGCGCGCTCGGCGTCCAGGGTCAGGGCACTGCCGCCGCGTCGCCTATGGGCACAGCGGAAGGTCGCGCCTCGGCCCTTGAGGCACAGGCGTCCGCGTTGGGCACATCCGCGCGACGCGGGGCTTCGTCGAGCTTTGGTGACTTTGGCGAGCGATCGACATTTGGCGCCAACCGCAGCTTCGGCGCGGCGAGCACGATGTTGGGTGAGCGCAACAGCGGGGTGCCAGGAGTGCCGGCATTCGGCATGGGCGGGATCGACGCGGCGCGCGAACTTGGCGGGCTCGCACCGGCGCTCGTCAATGGGGATCTGTCCAACCCTGCGACGCAACGCGCAGTCAGGGCCAACGCCACGACGGCCGCGTTTCAACAGTTCGCCGAGAAGGACGCGCTCCGGGCTTTGGGTACAACCTATTTCGGTTCCGGTCAGGCTGGTGAGCGCGCCTTCGCTGCGTTCTCGCAGCATCTGGTGCAATGGCGCGCCTTTGGGGATCAGCGCGCTTACGACATGATGCAGCAGGGCGCGACGCGGGCCTTCGAGCGAGGCGGCTACTCGCCGAAGGACGCTGCGCTGAAGGCGTCCGGTGTCATCGCTCAGGCCTCGGCGGACCCGACCTTTGCAAAGCTGACCGCCAATGCCTTCGACCAGGAAGCGATGCTCCGCAATGACATCACCTCCGCGCAGGTCCAGGTCGGTGCTATGGAAGGGCGGCGCGATTTCGCCGGCAACAAGGTCGCCGGCATCGAGCGCGGAAACGTGGCAACCGAGCAGGCCCATCGGACCGGCACCAACCAGGGACAACGCGACGCCGCCGGCATGCTTGGCCTGTCGGTTCAGGAGACCAGCCGCCGCATCGGCTTTATCAACGCGCTCGCCGGCGAAGCGCGCTCTTCCGCGATCACCCAACTCTCCCGCGCGACTGGCCGCAATGAGGCGCAGGTCGAGGACGCGCTCGAAACCTATAATGCGTCGACGCAACTCGGTACGGCGGATGGGGCCACCGCGGAAGCAGGACGCGAGGGAACGAGTGTCTACGGACGGACGCGCGAGACAGCCGGGTTCGATTTTGCCGAGCGCGCGGGCAAGCTCGACGCGCAACGCGAAGTTGGGCGGGACGGTACGAGGAGCGCGGCGCGCATCGGGGAAGAGCGTCGACAGTCGGACAATTTTGGGTTTGCGGAGGGCGCGGAGGCGGCAGGCGTCTCGACGCGCGAAGCTGCGCGGCTCGATAGCTTCATCCGCACGCTTGCCGGGACGGCCGGCAATCAGGTCGATATGGCTGACGGCGGCGCCGGTGGGATCGCGGATCGCGCGCGTAATGAGCGTACGTCTCGAATCGTCGACAATCAGCGCCTGACGCGAATGCAGGGGCTGCTGCGCGCCAATGGCATCACGATGACGAAGAAGCAGCTAGCGATGAGCCAGAATGGCGACCTTGCCATGAACGTAACGCCAGAGGTCGCTGGTCAACTGCGCCGCGCCGGGCTGATCAATGACAGCCAATATGGTGCAATTGCCGGTGGCGGTTCGGCGCGGTTCAGTTTCGCCGATAATGACCTCTTGGTGTCGAGCAGCACGGGTTTCACTAGATCGGCGCGTAGCGACACCAGCACACGCTTCGAAGCCGGCAAGCAGGCCGGCCCTGACACGATCGAGCATTTCCTCGGTGGCGGTGCCGAAGGAAAGGCCGCCATGGCCCATTGGCTCAAGGGCGGGTTCGAGATGGACCGCCAGGGGAATTGGCGGCTGAAACCGCAGGTCGCCGACACGCTCGAACGGGATGTTCAAGCAATTATGGCTCAAACCGGATGGTCGCGGAATATCACTCGTCGCGCGGAGGACAGCACCACTATGGGAACCGATGTCGGTCTTTCGGTTTCAGCAAGCGCGCAGCGCGGGTCCTCCAAGGGTGGCGGAAAAGGGAGCTCGGCATCTCTTTCCGGCGGCGCGGGCGGTTCGTTAGGTTTCGCAGGCAGCGACCGCGGAACAACTTCAGAGAATGCCGACGCTACACTAGACATAGTGAATTATGACGTGAGAGGAGCCGTAGCTTCCGCAGAACGCGCGGCATCTCGCTCGCCCAATCCGGAGCAAGCTTTTACACGAGTTCTCTCCGATCAGTTGCTTGGCGACCGTGGATTGCGGAACCGGTACCTCGAGAACGCTGATTCCGCGCGTGGGACAGCCGATATTACCGGACCCCTTACCTCGATCGAGCAATCGTCAGTCCTAGGCAGCGGCAGATTTTCGGATGATCTCGCTAACGGCCCGTTTGATGGTGATCCAAAATTCAAGGAGCGGCGGGATAAATGA
PROTEIN sequence
Length: 1244
MMRRILRAVVTVAALLAASPAFAVDTSFYTYDGFAETVDAFRLVAMIFADPRYETLVVVIATVGIAVGATLTAIRGQGMGLVAFGFQMLVGIGLFVGMIATTGTVHVYDKVRNAYQPVGGVPNLLVLVAGTTNLMERALVETIDDNTLDPDSKIEFGAGGHTFDLFFNAVAPRGPMTDTFLDATIKDYVRQCYPVARVSPAYGIDDDKLFRTTTDLPAAFAAMAGPATFSTVYTAADKGGTTKSCDESWQYISDRLSDPTLFDDYTRQVCLRTGFDATDANQLTRCRAQLGEVGGMMMGSPLSLQAFMTDVLLGNTVGDVLFEDSPATAARVMANRAVMSSGLATMSVANEWMPTIRAVVFGILLFMIPIALLFILTPINLRVMSFALGLFVFVALWGVIDAGIYQLTLGRAMGALAEMRSNANGANAWLLAPSSAQKALAIFGSFRTAAAGLAGAFVFTVFRFSGNVFTAFTSGALGVQGQGTAAASPMGTAEGRASALEAQASALGTSARRGASSSFGDFGERSTFGANRSFGAASTMLGERNSGVPGVPAFGMGGIDAARELGGLAPALVNGDLSNPATQRAVRANATTAAFQQFAEKDALRALGTTYFGSGQAGERAFAAFSQHLVQWRAFGDQRAYDMMQQGATRAFERGGYSPKDAALKASGVIAQASADPTFAKLTANAFDQEAMLRNDITSAQVQVGAMEGRRDFAGNKVAGIERGNVATEQAHRTGTNQGQRDAAGMLGLSVQETSRRIGFINALAGEARSSAITQLSRATGRNEAQVEDALETYNASTQLGTADGATAEAGREGTSVYGRTRETAGFDFAERAGKLDAQREVGRDGTRSAARIGEERRQSDNFGFAEGAEAAGVSTREAARLDSFIRTLAGTAGNQVDMADGGAGGIADRARNERTSRIVDNQRLTRMQGLLRANGITMTKKQLAMSQNGDLAMNVTPEVAGQLRRAGLINDSQYGAIAGGGSARFSFADNDLLVSSSTGFTRSARSDTSTRFEAGKQAGPDTIEHFLGGGAEGKAAMAHWLKGGFEMDRQGNWRLKPQVADTLERDVQAIMAQTGWSRNITRRAEDSTTMGTDVGLSVSASAQRGSSKGGGKGSSASLSGGAGGSLGFAGSDRGTTSENADATLDIVNYDVRGAVASAERAASRSPNPEQAFTRVLSDQLLGDRGLRNRYLENADSARGTADITGPLTSIEQSSVLGSGRFSDDLANGPFDGDPKFKERRDK*