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SCN18_14_9_16_R4_B_scaffold_1508

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1508_1
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(262..939)
DNA (678bp) protein (226aa)
Transposase, IS5 family n=1 Tax=Methylomicrobium album BG8 RepID=H8GKC5_METAL
Transposase, IS5 family {ECO:0000313|EMBL:EIC30416.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
transposase IS4 family protein
SCN18_14_9_16_R4_B_scaffold_1508_2
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1294..5025)
DNA (3732bp) protein (1244aa)
DNA transfer and F pilus assembly protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP72_9SPHN
DNA transfer and F pilus assembly protein {ECO:0000313|EMBL:CCA93224.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
DNA transfer and F pilus assembly protein
SCN18_14_9_16_R4_B_scaffold_1508_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5034..6479)
DNA (1446bp) protein (482aa)
Sex pilus assembly protein TraH n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z8Z2_SPHJU
traH; sex pilus assembly protein TraH
Sex pilus assembly protein TraH {ECO:0000313|EMBL:BAI99074.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCN18_14_9_16_R4_B_scaffold_1508_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6532..7131)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037BCB62
Uncharacterized protein {ECO:0000313|EMBL:EXS69535.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1508_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7128..8024)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CNJ4_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU73448.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
thioredoxin-like protein
SCN18_14_9_16_R4_B_scaffold_1508_6
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8021..8617)
DNA (597bp) protein (199aa)
Type IV secretory pathway protease TraF-like protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z8Y7_SPHJU
type IV secretory pathway protease TraF-like protein
Type IV secretory pathway protease TraF-like protein {ECO:0000313|EMBL:BAI99069.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCN18_14_9_16_R4_B_scaffold_1508_7
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8589..9479)
DNA (891bp) protein (297aa)
Type-F conjugative transfer system pilin assembly protein TrbC n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6ESV3_SPHCR
type-F conjugative transfer system pilin assembly protein TrbC
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:AEG48569.1}; Flags: Precursor;; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
SCN18_14_9_16_R4_B_scaffold_1508_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9448..10671)
DNA (1224bp) protein (408aa)
Mating pair stabilization protein TraN n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z8Y5_SPHJU
traN; mating pair stabilization protein TraN
Mating pair stabilization protein TraN {ECO:0000313|EMBL:BAI99067.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCN18_14_9_16_R4_B_scaffold_1508_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10668..11621)
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP81_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA93233.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Displaying 9 items

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