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SCN18_14_9_16_R4_B_scaffold_3240_6

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 3684..4169

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD10AF similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 144.0
  • Bit_score: 187
  • Evalue 9.00e-45
Redox-sensitive transcriptional activator SoxR {ECO:0000313|EMBL:GAO40227.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 148.0
  • Bit_score: 191
  • Evalue 6.70e-46
soxR; putative redox-sensitive transcriptional activator SoxR similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 149.0
  • Bit_score: 173
  • Evalue 2.90e-41

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Taxonomy

Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGGCGAACCCGATGTTATCGATTGGCGATCTCGCGCGCCGGACCGGGCTGACGGTTTCCGCCATCCGGTTCTACGAGGCACGCGGCCTGATCCAGCCGGAACGGACGTCCGGTAATCAGCGGCGGTTCCGCCGTTCCGACATCCGGCGGCTCTCGTTCATCCTGATCGTCCAGAAACTGGGTTTCAGCCTGACCGAGATCGAGGCCGCGCTCGCGTGTCTGCCGCAGGATCGCGCGCCAAGCCGCGCGGAATGGGCGGTCCTGGCGGAAGCGATTCAGCAGGCGCTGAGCGAGCGCGCGGCGGTTCTGCAGCGGACACAGGCGTTGCTGGATGCGTGCATCGGCTGCGGCTGCCTGTCGCTCGACGCCTGTGGACTGTACAATCCTCAGGATCGCGCCGGCGATGCCGGGCCTGGTCCACAATATGTCCTGGGCGGCGGCTCTCCCGCGCTCGCTCCCTCGGCCAGCGACCTCGGCAACGAATAG
PROTEIN sequence
Length: 162
MANPMLSIGDLARRTGLTVSAIRFYEARGLIQPERTSGNQRRFRRSDIRRLSFILIVQKLGFSLTEIEAALACLPQDRAPSRAEWAVLAEAIQQALSERAAVLQRTQALLDACIGCGCLSLDACGLYNPQDRAGDAGPGPQYVLGGGSPALAPSASDLGNE*