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SCN18_14_9_16_R4_B_scaffold_3240_7

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(4320..4748)

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transportern ExbD n=1 Tax=Sphingomonas melonis RepID=UPI00038192C2 similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 140.0
  • Bit_score: 221
  • Evalue 3.80e-55
Biopolymer transporter ExbD {ECO:0000313|EMBL:KHA65510.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 142.0
  • Bit_score: 225
  • Evalue 2.80e-56
biopolymer transporter ExbD similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 142.0
  • Bit_score: 219
  • Evalue 3.10e-55

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGGCAATGAGTGGCGGCCGCGACGACGGCGAGCCGATGATGGAAATGAACACGACGCCGTTGATCGACGTCATGCTCGTTCTCCTCATCATGTTCATTATTACGATCCCGATCCAGACCCACGCGGTTAAGGTCGATCTGCCGCAGAATCAGCAGAATCAGCCGCCGCCCCCGGTCCTGCCGGACAAGAATGTCGTCGCGATCGACATCAACGGCACGGTGACCTGGAACGGAACCCCGGTCGATATGGTGACGCTGCGTCAGTATCTCGACGTTGCGGCGGGCATGAACCCGGAGCCGGAGCTGCACTTCCAGCCCGACCGGCAGGCCCGTTACGACACGGTTGACCGGACGCTGGCGGTGATCAAGCGTTCGCGCGTGACCAAGCTCGGCTTCATCGGCAACGAGCAATATTATCGCGATTTCTGA
PROTEIN sequence
Length: 143
MAMSGGRDDGEPMMEMNTTPLIDVMLVLLIMFIITIPIQTHAVKVDLPQNQQNQPPPPVLPDKNVVAIDINGTVTWNGTPVDMVTLRQYLDVAAGMNPEPELHFQPDRQARYDTVDRTLAVIKRSRVTKLGFIGNEQYYRDF*