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SCN18_14_9_16_R4_B_scaffold_3134_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 1439..1996

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3E5F7 similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 177.0
  • Bit_score: 209
  • Evalue 1.50e-51
TetR family transcriptional regulator {ECO:0000313|EMBL:EGD59242.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 182.0
  • Bit_score: 203
  • Evalue 2.60e-49
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 184.0
  • Bit_score: 188
  • Evalue 1.00e-45

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGACGGCTGCGGCGAAACCCTATCACCACGGCGATCTGCGCGCGGCGCTGGTCGCGGAAGGCTTGCTGCTGATCGAGGAGCAGGATGCCGACGATCTGTCGCTGCGCGAACTCGCGCGACGGGTGGGGGTCAGCGCGACCGCGGTCTATCGCCATTTCCCCGACAAGGCCGCGCTGATGGCGGCGCTCGCGGGTGAGGCGCTGACGCGGCTGGCGGCGGCGCAGCGCGCGGCATCCGAGCGGGCCGGCGGCGGGGCGGCGGGGTTCAGCGCGACGGGAGCGGCCTATGTTCGCTTCGCACGCGACAATCCGGGGCTGTTCCGGCTGGTCTTTGCGCACCCGGTGACGCCCGGCCACGCCGAAAATTCGAACGACGAGGCGATGACGATGCTCAAGGCCGGTGCCGCGGCGCTGGCGGCGCCGGGGACGGACGCGCGCGTCTTCGCGCTGCGCTCATGGGCGCTCGCGCACGGCCTCGCGATGCTGATGCTCGACGGTCAGGTCCAGGTGGACGACGCGACGATCGATCGGGTGATCGATGTCACGATGACCGGCTAG
PROTEIN sequence
Length: 186
MTAAAKPYHHGDLRAALVAEGLLLIEEQDADDLSLRELARRVGVSATAVYRHFPDKAALMAALAGEALTRLAAAQRAASERAGGGAAGFSATGAAYVRFARDNPGLFRLVFAHPVTPGHAENSNDEAMTMLKAGAAALAAPGTDARVFALRSWALAHGLAMLMLDGQVQVDDATIDRVIDVTMTG*