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SCN18_14_9_16_R4_B_scaffold_3134

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_3134_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1339)
DNA (1338bp) protein (446aa)
carotenoid oxygenase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002892747
Carotenoid oxygenase {ECO:0000313|EMBL:KJS35388.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. BRH_c22.;"
carotenoid oxygenase
SCN18_14_9_16_R4_B_scaffold_3134_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1439..1996
DNA (558bp) protein (186aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3E5F7
TetR family transcriptional regulator {ECO:0000313|EMBL:EGD59242.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
TetR family transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_3134_3
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1993..2877)
DNA (885bp) protein (295aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
glucose-1-phosphate thymidylyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6E5ED
glucose-1-phosphate thymidylyltransferase
SCN18_14_9_16_R4_B_scaffold_3134_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2874..3764)
DNA (891bp) protein (297aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B68165
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AJP74797.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_14_9_16_R4_B_scaffold_3134_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3764..4819)
DNA (1056bp) protein (352aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5AABE
dTDP-glucose 4,6-dehydratase
SCN18_14_9_16_R4_B_scaffold_3134_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4828..5394)
DNA (567bp) protein (189aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B306F7
dTDP-L-rhamnose biosynthesis protein {ECO:0000313|EMBL:EZP55133.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
dTDP-4-dehydrorhamnose 3,5-epimerase
SCN18_14_9_16_R4_B_scaffold_3134_7
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5450..5767)
DNA (318bp) protein (106aa)
acsA4; acetoacetyl-coenzyme A synthetase AcsA (EC:6.2.1.16)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036A3D19
Uncharacterized protein {ECO:0000313|EMBL:KKO08941.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 7 items

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