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SCN18_14_9_16_R4_B_scaffold_3134_6

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(4828..5394)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B306F7 similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 183.0
  • Bit_score: 286
  • Evalue 1.30e-74
dTDP-L-rhamnose biosynthesis protein {ECO:0000313|EMBL:EZP55133.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 184.0
  • Bit_score: 311
  • Evalue 5.20e-82
dTDP-4-dehydrorhamnose 3,5-epimerase similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 190.0
  • Bit_score: 295
  • Evalue 1.00e-77

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGAGCGATAATCCAGTCCAACTGATCGATCCGGTGCGCCACGGCGACGCGCGCGGCTGGTTCACCGAATATTATACCGAGCGCCGCTTCGCCGAGCGCGGCATCACCTGCCGCTTCGTGCAGGACAATCATTCGCTGTCGGTGCCGGCGCTGACCTTGCGCGGGCTGCATTTCCAGACCCCGCCGCACGGGCAGGACAAATTGGTGCGCTGCATCCGCGGCCGCATCCTCGACGTCGCGGTCGACGTCCGGCGCGGTTCGCCGACCTATGGCCAATCGGTTGCGGCGGAATTGTCGGCGGAGAACGGGCGGCAGTTGTTCGTGCCGATCGGCTTCGCGCACGCCTTCCTCACGCTCGAGGACAATTGCGAGGTGACCTACAAGGTCTCCGATTATTACGCCCCCGATTGCGACGGCGGCATCCGCTGGGACAGCGTCGGGATCGACTGGCCGGTCCCGGCCGGCGCGTCGCCCGAATTGTCGGCGAAGGACGCCAGGCTCCCGACGCTGGCCGAATTCGACAGCCCCTTCCCCTATGACGGTCGCCCGCTGGCGCCGCTTGCTTGA
PROTEIN sequence
Length: 189
MSDNPVQLIDPVRHGDARGWFTEYYTERRFAERGITCRFVQDNHSLSVPALTLRGLHFQTPPHGQDKLVRCIRGRILDVAVDVRRGSPTYGQSVAAELSAENGRQLFVPIGFAHAFLTLEDNCEVTYKVSDYYAPDCDGGIRWDSVGIDWPVPAGASPELSAKDARLPTLAEFDSPFPYDGRPLAPLA*