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SCN18_14_9_16_R4_B_scaffold_1829_5

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 4220..4933

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 236.0
  • Bit_score: 415
  • Evalue 4.20e-113
ribonuclease PH n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC5A5 similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 237.0
  • Bit_score: 429
  • Evalue 2.00e-117
ribonuclease PH similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 236.0
  • Bit_score: 411
  • Evalue 9.40e-113

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCGCCCCAGCGGCCGCACCCCCGATCAGATGCGCGCGATCATCATCGAACCCCGCTTCACCCGTCATGCCGAAGGATCGGTGCTGATCGGGTTCGGCGATACCAAGGTGATCGTCACCGCCAGCATCGAAGAGCGCGTGCCCCCGTTCCTGCGCGGCAAGGGCCAGGGCTGGGTCACCGCCGAATATGGCATGCTGCCGCGCGCCACCCACACCCGCGGCAGCCGCGAGGCGGCGAAGGGCAAGCAATCCGGCCGCACGCAGGAAATCCAGCGGCTGATCGGCCGCAGCCTGCGCGCCGTGACCGATCTCGCCGCGCTCGGCGAGCGCCAGATCACGCTCGATTGCGACGTGATCCAGGCCGACGGCGGCACCCGCACCGCGTCGATCTCCGGGGCGTGGGTCGCGCTGCGGCTCGCGGTCAACGGCCTGCTCGCCGCGGGCAAGCTGGAACGCGATCCGATCACCCAGAAGGTCGCGGCGGTCAGCTGCGGCATCTTCCAGGGCAATCCGGTGCTCGATCTCGATTATGACGAGGATTCGAACGCCGACGCCGACGCCAATTTCGTGCTGCTCGAAAACGGCCATATCGCCGAGGCGCAGGCCACCGCCGAACACGCCACCTATGACGAAGAAGCGCTGCTGCGCCTGCTCCGCCTCGCGCGGATCGGCTGCACCGAGATCTTCGCCGCACAGGCGAGTGCGGTGGCGTGA
PROTEIN sequence
Length: 238
MRPSGRTPDQMRAIIIEPRFTRHAEGSVLIGFGDTKVIVTASIEERVPPFLRGKGQGWVTAEYGMLPRATHTRGSREAAKGKQSGRTQEIQRLIGRSLRAVTDLAALGERQITLDCDVIQADGGTRTASISGAWVALRLAVNGLLAAGKLERDPITQKVAAVSCGIFQGNPVLDLDYDEDSNADADANFVLLENGHIAEAQATAEHATYDEEALLRLLRLARIGCTEIFAAQASAVA*