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SCN18_14_9_16_R4_B_scaffold_2337_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 1522..4482

Top 3 Functional Annotations

Value Algorithm Source
IncW plasmid conjugative relaxase protein TrwC (TraI homolog) n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MHA4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 990.0
  • Bit_score: 1424
  • Evalue 0.0
IncW plasmid conjugative relaxase protein TrwC (TraI homolog) {ECO:0000313|EMBL:CCW16346.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 990.0
  • Bit_score: 1424
  • Evalue 0.0
TrwC protein similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 981.0
  • Bit_score: 1401
  • Evalue 0.0

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Taxonomy

SCNPILOT_SOLID_1_TRIM150_Plasmid_2 → SCNPILOT_SOLID_1_TRIM150_Plasmid_2 → SCNPILOT_SOLID_1_TRIM150_Plasmid_2 → SCNPILOT_SOLID_1_TRIM150_Plasmid_2 → SCNPILOT_SOLID_1_TRIM150_Plasmid_2 → Plasmid-like

Sequences

DNA sequence
Length: 2961
ATGATCCATCCCCGCCGCCTGAAAGGTACGCCCGGCAATATTGCCCGCTATTATACGGTGGGCGATTATTACACCAAAGGGAGCGACGAACATTCAGAATGGGGTGGCCGGATAGCGGTTGAGTTAGGGCTATCCGGCCCGGTCGATCCCCAGACTTTCCAAGAGTTGCTGGCCGGAAAGATCGACGACCAGCAACTCGGCCGCCACCGTGCCAACGGCGAGATCGAGCATCACCCCGGCTGGGACTTCGCCGTCAATGCGCCGAAATCGGTATCGATCATGGCGCTGGTGATGGGCGACGAGCGGATAATCGCCGCCCATGAGAAAGCAGTCGGGACGGCGCTCGAATATCTCGAAGAACATGCGTCCCTGCGCCGACGCGACAACGGCCAGATCGTTCACGAGACGACTGGTCGACTGATTTTTGCCCGCTTCACCGAACATGCCAGCCGCGAGCTCGATCCCCATCTCCATACCCATGTTGTCGTGATGAACATCACGAACCGAGAGGACGGTTCGTCCTGGGCCAGCCTCGAGACACGGGCGATGTTCGCCGAGCAGATGGTTGCGGGGCAGGTCTATCGAAACGACCTCGCCCATGAGCTTCGCCAGATCGGATACGAAGTCGAATTCGACCCCAGACGGGGGCTGTTCGAGATCGTCGGCGTTCCCAAGGACTTTATCAAGGACACCTCCCAGCGCGCTGGACAGATCGATGCCCATGCCAAGGAGCATGGGCTCACCGGACAGGCAGCGCGTCGCCAATCCTTCTACCAGACGCGCGGTCCCAAGGTGACGGCGACACTCGACGAGTTCCACATCCAGTGGGCCGCGCGCGCGAAACCCTATGAGGCGGACCTCGCCAAACTCACCGCGCAGGTCGAGGAACGGGGCACGTCGATCATCGACGTCGACCGCCGAACCGCCGGTCGCGCGAGTCTGTTCGGCCTGCGGCAGGCGGAGACACGCGAAGCCGTGAACAATCTCGGCCGCATGTACGGGTTGGCGCTGGCCAGCCATGTCGGAGAGGTGAGGCTTGCCGATGTCCGGCCGTTGCTTGCCGAGCATGAGGCGAAGCACAAGCTCCTCGTCACCCGTGCGCCGACGGGCGATCAGACTCTAACCCGCGGCCGGACCAGCAGGCGCAGCGCTCGCCAGGAAATGGCGCTGTCGCAGCACCTCGCTTTGGCCCTGGATGATGCCCGACCCATCGCCACCGCCGACCGCCTCCTGGTCGCGCTGGAGACCGCTGGCCTCACGCCCCATCAGGAGCAGGCCCTCGTTCAATCGGCCTTGTCGCGGGACCGGGTCACTGGCATCCACGGCGTCGGCGGCGCCGGCAAATCGACGTTGATGAATACCCTGAGACAGGCGGCCGAGCCGGGAACGGTGCTGGTCGCGCTGGCCCCCACATCGTCAGCCGCTGCGACCACGGGTCAGATCGCGGGTGTCGAATCGAGAACGGTCGAAAGCGTTCTCACCAGCGGTGGTCGCGGCATCACCGACCGCCATGTTCTCCTCCTCGATGAGGCCGGGCAACTCGGGACACGCCAGGCCATTCGCATCCTCGAGATCAGCCGGATGACGGGCGCGCGGCTGATCCTGCTCGGCGATGACAAGCAGACCGGCGCGATCGAACAGGGGAAGCCCTTCTGGCTGATGCAGAAGTTCGGCCTCGCCACGGCGCAACTCACCGAGTCGATGCGCCAGCAGACCAAAAGCATGAAGGCCGCGGTCACCCATGCGCGGGCCGCGGAATATGCCGCCTCGCTGTCACACCTCGACAAGGTCGTGAGCGGGGAGGGGGCCGAGGCGCTCGCCAAGGGCCTCGTCGCGGAATGGACCCGGCTCAAGCCGGAGAACCGCGCCACCACGAACATCCTGGTGCTCGACAATGCCACCCGGCTGATCGTGAACTCAAAGAGTCGCGAAACCCTGAAATCGGAAAGCGCGATCGCGGCCGAAGACGCACGGCTCCAGGTCCTGACGCCGAGCGGCATGTCCGACCAGGAGAAACACTATGCCCGATTTTATTCAGGCGGCCAGGTCGTGACCTTCACGCGGGATCAGCTCGGCGCGGGGATCGCGCGCGACGTCCAATATCGTGTTGTCGGTATCGGACGCGCCGAGAACGGGCGGCAGGTCGTGCGACTGGTCGACGAAAACGGCCGGATGATCCGCTGGGATCCGCGGCAGAGTCAGGTCAAGCAGATCAACGTGTTCAACGCGGAGAATCGCGACCTCGCGGAAGGCGATCGCATCCAATGGCGTCTGGTGAACAATGCGCTCGATCTAAAGAATGCCGAGCGTGGCACGGTCGAAAAGATGGATGGAACCGTTGCCACGATCCGTTGGGACCGAGGCGAGCGCGTGCAGCAGATCGACCTGTCCGAGCACAAGCACTGGGACCACGGATACGCAGAGACCGTATATTCCGCGCAGTCCAAGACCTACGCCCGGGTGTATGTGCTGGCGCCGGTCAATTCCGGGCTCGTGAACGGCCAGAATTATTATACGGCGATCACCCGCGCGCGCTTCGGCGTGAAGCTCTGGACCGAGGACGAGAAGCGCCTCGCCGAGAAGCTCGAGACCCATTCCGGCGAAAAGACGTCCGCGCTGGAAGGGCTCGGAAGGCTGGACAGGGATAGCCGCGACAGCCTCGCCGCGCGTCATGCAGACCCGATTGAGCGAGCTCGGGCGGACCAGGATCGTGAGCGGTCCGAGCGGCGCGACATGGCCCTTGGCCGGCAACTCGACCAACGGACGAATGCGCCAAGGGGCCTGCCGGAGCGGCTGGCTGAAAATGCCCGCGGGATTGCCGACATCCTCGACCGCTTCCTGCAATCTGTCGTCGATCGCGCGCCTGCCGAAGCCGATCGCGCCGACGCCCGAACCGACCCAGCGCCCGCCCAAGTACATGACTCCCGTGACGCCGATTCCGGCCACGGTCCGGAACATTGA
PROTEIN sequence
Length: 987
MIHPRRLKGTPGNIARYYTVGDYYTKGSDEHSEWGGRIAVELGLSGPVDPQTFQELLAGKIDDQQLGRHRANGEIEHHPGWDFAVNAPKSVSIMALVMGDERIIAAHEKAVGTALEYLEEHASLRRRDNGQIVHETTGRLIFARFTEHASRELDPHLHTHVVVMNITNREDGSSWASLETRAMFAEQMVAGQVYRNDLAHELRQIGYEVEFDPRRGLFEIVGVPKDFIKDTSQRAGQIDAHAKEHGLTGQAARRQSFYQTRGPKVTATLDEFHIQWAARAKPYEADLAKLTAQVEERGTSIIDVDRRTAGRASLFGLRQAETREAVNNLGRMYGLALASHVGEVRLADVRPLLAEHEAKHKLLVTRAPTGDQTLTRGRTSRRSARQEMALSQHLALALDDARPIATADRLLVALETAGLTPHQEQALVQSALSRDRVTGIHGVGGAGKSTLMNTLRQAAEPGTVLVALAPTSSAAATTGQIAGVESRTVESVLTSGGRGITDRHVLLLDEAGQLGTRQAIRILEISRMTGARLILLGDDKQTGAIEQGKPFWLMQKFGLATAQLTESMRQQTKSMKAAVTHARAAEYAASLSHLDKVVSGEGAEALAKGLVAEWTRLKPENRATTNILVLDNATRLIVNSKSRETLKSESAIAAEDARLQVLTPSGMSDQEKHYARFYSGGQVVTFTRDQLGAGIARDVQYRVVGIGRAENGRQVVRLVDENGRMIRWDPRQSQVKQINVFNAENRDLAEGDRIQWRLVNNALDLKNAERGTVEKMDGTVATIRWDRGERVQQIDLSEHKHWDHGYAETVYSAQSKTYARVYVLAPVNSGLVNGQNYYTAITRARFGVKLWTEDEKRLAEKLETHSGEKTSALEGLGRLDRDSRDSLAARHADPIERARADQDRERSERRDMALGRQLDQRTNAPRGLPERLAENARGIADILDRFLQSVVDRAPAEADRADARTDPAPAQVHDSRDADSGHGPEH*