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SCN18_14_9_16_R4_B_scaffold_2337

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2337_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1525
DNA (1524bp) protein (508aa)
TraD n=1 Tax=Sphingobium japonicum BiD32 RepID=N1ML58_9SPHN
TraD {ECO:0000313|EMBL:CCW16347.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2337_2
SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, Plasmid-like

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1522..4482
DNA (2961bp) protein (987aa)
IncW plasmid conjugative relaxase protein TrwC (TraI homolog) n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MHA4_9SPHN
IncW plasmid conjugative relaxase protein TrwC (TraI homolog) {ECO:0000313|EMBL:CCW16346.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
TrwC protein
SCN18_14_9_16_R4_B_scaffold_2337_3
SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, Plasmid-like

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4500..5174
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INU9_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA93101.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCN18_14_9_16_R4_B_scaffold_2337_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5250..5525
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CUJ1_SPHYA
Integration host factor {ECO:0000313|EMBL:KFD27943.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
histone-like DNA-binding protein
SCN18_14_9_16_R4_B_scaffold_2337_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5830..6180
DNA (351bp) protein (117aa)
Aha1 domain-containing protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002893C55
Uncharacterized protein {ECO:0000313|EMBL:EQB11358.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2337_6
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7041..7808
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000371DB81
resolvase
Resolvase {ECO:0000313|EMBL:ABA04511.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Displaying 6 items

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